Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm45857-201ENSMUST00000212207 356 ntBASIC7.47□□□□□ -1.21
Cux1P53564 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC7.47□□□□□ -1.21
Cux1P53564 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
Cux1P53564 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Cux1P53564 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Cux1P53564 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Cux1P53564 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Cux1P53564 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC7.47□□□□□ -1.21
Cux1P53564 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Cux1P53564 Gm19666-201ENSMUST00000198176 1893 ntBASIC7.47□□□□□ -1.21
Cux1P53564 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Cux1P53564 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Cux1P53564 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Cux1P53564 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Cux1P53564 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Cux1P53564 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Cux1P53564 Gm23178-201ENSMUST00000116782 95 ntBASIC7.47□□□□□ -1.21
Cux1P53564 Gm12186-201ENSMUST00000119050 945 ntBASIC7.47□□□□□ -1.21
Cux1P53564 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC7.47□□□□□ -1.21
Cux1P53564 Gm44816-201ENSMUST00000206666 477 ntBASIC7.47□□□□□ -1.21
Cux1P53564 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Cux1P53564 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC7.46□□□□□ -1.21
Cux1P53564 Gm37115-201ENSMUST00000193750 2849 ntBASIC7.46□□□□□ -1.21
Cux1P53564 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC7.46□□□□□ -1.22
Cux1P53564 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Cux1P53564 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Cux1P53564 Gm26300-201ENSMUST00000102282 94 ntBASIC7.46□□□□□ -1.22
Cux1P53564 Gm24507-201ENSMUST00000157683 134 ntBASIC7.46□□□□□ -1.22
Cux1P53564 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC7.46□□□□□ -1.22
Cux1P53564 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC7.46□□□□□ -1.22
Cux1P53564 Gm2522-201ENSMUST00000204280 322 ntBASIC7.46□□□□□ -1.22
Cux1P53564 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Cux1P53564 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Cux1P53564 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cux1P53564 AC154184.1-201ENSMUST00000224375 1620 ntBASIC7.45□□□□□ -1.22
Cux1P53564 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cux1P53564 Mir761-201ENSMUST00000103245 76 ntBASIC7.45□□□□□ -1.22
Cux1P53564 Gm9308-201ENSMUST00000119073 448 ntBASIC7.45□□□□□ -1.22
Cux1P53564 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC7.45□□□□□ -1.22
Cux1P53564 Gm14500-201ENSMUST00000121647 113 ntBASIC7.45□□□□□ -1.22
Cux1P53564 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC7.45□□□□□ -1.22
Cux1P53564 Gm27834-201ENSMUST00000183427 125 ntBASIC7.45□□□□□ -1.22
Cux1P53564 Dlx6os1-204ENSMUST00000184182 146 ntBASIC7.45□□□□□ -1.22
Cux1P53564 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC7.45□□□□□ -1.22
Cux1P53564 Gm28615-201ENSMUST00000187527 482 ntBASIC7.45□□□□□ -1.22
Cux1P53564 Gm18181-201ENSMUST00000190670 736 ntBASIC7.45□□□□□ -1.22
Cux1P53564 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC7.45□□□□□ -1.22
Cux1P53564 Gm23300-201ENSMUST00000082712 125 ntBASIC7.45□□□□□ -1.22
Cux1P53564 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cux1P53564 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Cux1P53564 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
Cux1P53564 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cux1P53564 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC7.45□□□□□ -1.22
Cux1P53564 Naip3-201ENSMUST00000118082 4208 ntBASIC7.45□□□□□ -1.22
Cux1P53564 Gm44894-201ENSMUST00000205280 2174 ntBASIC7.44□□□□□ -1.22
Cux1P53564 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC7.44□□□□□ -1.22
Cux1P53564 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Cux1P53564 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC7.44□□□□□ -1.22
Cux1P53564 AC159326.1-201ENSMUST00000219989 1302 ntBASIC7.44□□□□□ -1.22
Cux1P53564 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Cux1P53564 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Cux1P53564 Gm14688-201ENSMUST00000119169 303 ntBASIC7.44□□□□□ -1.22
Cux1P53564 Gm12820-201ENSMUST00000119233 342 ntBASIC7.44□□□□□ -1.22
Cux1P53564 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC7.44□□□□□ -1.22
Cux1P53564 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC7.44□□□□□ -1.22
Cux1P53564 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Cux1P53564 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC7.44□□□□□ -1.22
Cux1P53564 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Cux1P53564 Gm45222-201ENSMUST00000207029 4307 ntBASIC7.44□□□□□ -1.22
Cux1P53564 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Cux1P53564 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC7.44□□□□□ -1.22
Cux1P53564 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Cux1P53564 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Cux1P53564 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Cux1P53564 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Cux1P53564 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Cux1P53564 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Cux1P53564 Gm43426-201ENSMUST00000197287 2597 ntBASIC7.43□□□□□ -1.22
Cux1P53564 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cux1P53564 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cux1P53564 Gm23273-201ENSMUST00000104058 135 ntBASIC7.43□□□□□ -1.22
Cux1P53564 Gm25726-201ENSMUST00000104529 129 ntBASIC7.43□□□□□ -1.22
Cux1P53564 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Cux1P53564 Gm14303-201ENSMUST00000121320 171 ntBASIC7.43□□□□□ -1.22
Cux1P53564 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cux1P53564 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Cux1P53564 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Cux1P53564 Gm13249-201ENSMUST00000177803 345 ntBASIC7.43□□□□□ -1.22
Cux1P53564 Gm13144-201ENSMUST00000179385 345 ntBASIC7.43□□□□□ -1.22
Cux1P53564 Gm25942-201ENSMUST00000180080 110 ntBASIC7.43□□□□□ -1.22
Cux1P53564 Mir3620-201ENSMUST00000184710 61 ntBASIC7.43□□□□□ -1.22
Cux1P53564 Gm28859-201ENSMUST00000186650 616 ntBASIC7.43□□□□□ -1.22
Cux1P53564 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Cux1P53564 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Cux1P53564 Gm18255-201ENSMUST00000211316 765 ntBASIC7.43□□□□□ -1.22
Cux1P53564 Gm8911-201ENSMUST00000213986 652 ntBASIC7.43□□□□□ -1.22
Cux1P53564 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC7.43□□□□□ -1.22
Cux1P53564 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Cux1P53564 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cux1P53564 Gm44518-201ENSMUST00000208080 4370 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms