Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.89□□□□□ -1.47
Shmt1P50431 AL603630.1-201ENSMUST00000214781 147 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.89□□□□□ -1.47
Shmt1P50431 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 Gm7768-201ENSMUST00000222988 597 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Shmt1P50431 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.89□□□□□ -1.47
Shmt1P50431 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Shmt1P50431 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Shmt1P50431 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Shmt1P50431 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Shmt1P50431 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Shmt1P50431 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm25647-201ENSMUST00000101832 78 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm25823-201ENSMUST00000101995 78 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Shmt1P50431 Gm23987-201ENSMUST00000117039 129 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm13607-201ENSMUST00000117875 539 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm15490-201ENSMUST00000119894 387 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm13459-201ENSMUST00000121558 646 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm11679-201ENSMUST00000121830 779 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm11575-201ENSMUST00000122243 228 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Gm24220-201ENSMUST00000177753 79 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm25988-201ENSMUST00000177759 79 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm23471-201ENSMUST00000177886 79 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm26488-201ENSMUST00000178225 79 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm4617-201ENSMUST00000178993 331 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Shmt1P50431 Gm23449-201ENSMUST00000179208 79 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm25221-201ENSMUST00000180051 79 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Mir6417-201ENSMUST00000183815 116 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Gm37088-201ENSMUST00000193887 406 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Gm44673-201ENSMUST00000205692 996 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.88□□□□□ -1.47
Shmt1P50431 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.88□□□□□ -1.47
Shmt1P50431 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.88□□□□□ -1.47
Shmt1P50431 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 AC154838.1-201ENSMUST00000228944 911 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Shmt1P50431 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Shmt1P50431 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.88□□□□□ -1.47
Shmt1P50431 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Shmt1P50431 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Shmt1P50431 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Shmt1P50431 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Shmt1P50431 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.88□□□□□ -1.47
Shmt1P50431 Naip3-201ENSMUST00000118082 4208 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Shmt1P50431 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Shmt1P50431 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.88□□□□□ -1.47
Shmt1P50431 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Shmt1P50431 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Shmt1P50431 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shmt1P50431 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
Shmt1P50431 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.87□□□□□ -1.47
Shmt1P50431 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.87□□□□□ -1.47
Shmt1P50431 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.87□□□□□ -1.47
Shmt1P50431 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Shmt1P50431 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Shmt1P50431 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shmt1P50431 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.87□□□□□ -1.47
Shmt1P50431 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shmt1P50431 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
Shmt1P50431 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Shmt1P50431 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shmt1P50431 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Shmt1P50431 Gm22194-201ENSMUST00000116869 95 ntBASIC5.87□□□□□ -1.47
Shmt1P50431 Gm15185-201ENSMUST00000117397 746 ntBASIC5.87□□□□□ -1.47
Shmt1P50431 Gm14007-201ENSMUST00000118288 210 ntBASIC5.87□□□□□ -1.47
Shmt1P50431 Gm14985-201ENSMUST00000118693 786 ntBASIC5.87□□□□□ -1.47
Shmt1P50431 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.87□□□□□ -1.47
Shmt1P50431 Gm15488-201ENSMUST00000121682 670 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms