Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Traf1P39428 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Traf1P39428 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Traf1P39428 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Traf1P39428 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Traf1P39428 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Traf1P39428 Gm37124-201ENSMUST00000192140 1992 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Traf1P39428 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Traf1P39428 Gm23593-201ENSMUST00000104309 120 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC6.01□□□□□ -1.45
Traf1P39428 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC6.01□□□□□ -1.45
Traf1P39428 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Traf1P39428 Gm12281-201ENSMUST00000119536 298 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Gm15791-201ENSMUST00000120365 319 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Gm15530-201ENSMUST00000122206 555 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Gm7316-201ENSMUST00000165395 445 ntBASIC6.01□□□□□ -1.45
Traf1P39428 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Traf1P39428 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Traf1P39428 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Traf1P39428 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Gm29664-201ENSMUST00000191125 463 ntBASIC6.01□□□□□ -1.45
Traf1P39428 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC6.01□□□□□ -1.45
Traf1P39428 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Traf1P39428 Gm4574-201ENSMUST00000207804 542 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Gm18127-201ENSMUST00000208479 725 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.01□□□□□ -1.45
Traf1P39428 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC6.01□□□□□ -1.45
Traf1P39428 AC153553.1-201ENSMUST00000218257 684 ntBASIC6.01□□□□□ -1.45
Traf1P39428 AC123064.1-201ENSMUST00000218950 406 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Gm19189-201ENSMUST00000221689 754 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.01□□□□□ -1.45
Traf1P39428 AC154239.1-201ENSMUST00000228565 406 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Traf1P39428 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Traf1P39428 Gm23972-201ENSMUST00000083322 165 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Traf1P39428 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Traf1P39428 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Traf1P39428 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Traf1P39428 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Traf1P39428 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Traf1P39428 Gm7416-201ENSMUST00000117448 1487 ntBASIC6.01□□□□□ -1.45
Traf1P39428 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
Traf1P39428 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Traf1P39428 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Traf1P39428 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Traf1P39428 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC6□□□□□ -1.45
Traf1P39428 AC154640.4-201ENSMUST00000226647 4640 ntBASIC6□□□□□ -1.45
Traf1P39428 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Traf1P39428 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC6□□□□□ -1.45
Traf1P39428 Gm37814-201ENSMUST00000195820 3644 ntBASIC6□□□□□ -1.45
Traf1P39428 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Traf1P39428 Gm24578-201ENSMUST00000103970 129 ntBASIC6□□□□□ -1.45
Traf1P39428 Gm3267-201ENSMUST00000118671 473 ntBASIC6□□□□□ -1.45
Traf1P39428 Gm13808-201ENSMUST00000121353 184 ntBASIC6□□□□□ -1.45
Traf1P39428 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC6□□□□□ -1.45
Traf1P39428 Gm5699-201ENSMUST00000152491 723 ntBASIC6□□□□□ -1.45
Traf1P39428 Gm9294-201ENSMUST00000165198 789 ntBASIC6□□□□□ -1.45
Traf1P39428 Gm27551-201ENSMUST00000184258 77 ntBASIC6□□□□□ -1.45
Traf1P39428 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC6□□□□□ -1.45
Traf1P39428 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6□□□□□ -1.45
Traf1P39428 Gm5284-201ENSMUST00000199053 903 ntBASIC6□□□□□ -1.45
Traf1P39428 Gm18330-201ENSMUST00000199246 547 ntBASIC6□□□□□ -1.45
Traf1P39428 Gm7721-201ENSMUST00000200446 546 ntBASIC6□□□□□ -1.45
Traf1P39428 Gm42579-201ENSMUST00000200512 734 ntBASIC6□□□□□ -1.45
Traf1P39428 Gm4321-201ENSMUST00000200520 442 ntBASIC6□□□□□ -1.45
Traf1P39428 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6□□□□□ -1.45
Traf1P39428 Gm32453-201ENSMUST00000204183 456 ntBASIC6□□□□□ -1.45
Traf1P39428 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC6□□□□□ -1.45
Traf1P39428 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC6□□□□□ -1.45
Traf1P39428 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6□□□□□ -1.45
Traf1P39428 AC163646.1-201ENSMUST00000227704 397 ntBASIC6□□□□□ -1.45
Traf1P39428 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
Traf1P39428 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC6□□□□□ -1.45
Traf1P39428 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
Traf1P39428 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Traf1P39428 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Traf1P39428 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC6□□□□□ -1.45
Traf1P39428 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Traf1P39428 Gm43462-201ENSMUST00000200265 3648 ntBASIC6□□□□□ -1.45
Traf1P39428 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Traf1P39428 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Traf1P39428 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Traf1P39428 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC6□□□□□ -1.45
Traf1P39428 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Traf1P39428 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.99□□□□□ -1.45
Traf1P39428 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.99□□□□□ -1.45
Traf1P39428 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Traf1P39428 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.99□□□□□ -1.45
Traf1P39428 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.99□□□□□ -1.45
Traf1P39428 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
Traf1P39428 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Traf1P39428 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Traf1P39428 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.99□□□□□ -1.45
Traf1P39428 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Traf1P39428 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms