Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm5558-201ENSMUST00000178933 495 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm27568-201ENSMUST00000184220 99 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm29299-201ENSMUST00000185609 923 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm28468-201ENSMUST00000188536 615 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm29573-201ENSMUST00000190291 919 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm8599-201ENSMUST00000193033 457 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm35570-201ENSMUST00000198730 681 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm4321-201ENSMUST00000200520 442 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm18599-201ENSMUST00000206729 1125 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC7.08□□□□□ -1.28
Col18a1P39061 AC134439.2-201ENSMUST00000221950 467 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 AC154552.5-201ENSMUST00000222352 207 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 CT025556.1-201ENSMUST00000222965 1884 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC7.08□□□□□ -1.28
Col18a1P39061 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col18a1P39061 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 AC121942.1-201ENSMUST00000224459 2891 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm7919-201ENSMUST00000202043 1389 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm16007-201ENSMUST00000117837 286 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm7312-201ENSMUST00000118798 469 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm11584-201ENSMUST00000120636 325 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col18a1P39061 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm24905-201ENSMUST00000158129 104 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm17121-201ENSMUST00000170414 847 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm21758-201ENSMUST00000179336 819 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm17222-201ENSMUST00000180135 847 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm29647-201ENSMUST00000188795 666 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm8403-201ENSMUST00000189712 1298 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm28404-201ENSMUST00000190242 453 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms