Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Sdc1P18828 Gm23467-201ENSMUST00000157127 159 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Gm17060-201ENSMUST00000172394 824 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Mir5125-201ENSMUST00000175240 79 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.03□□□□□ -1.76
Sdc1P18828 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Sdc1P18828 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Sdc1P18828 Gm37883-201ENSMUST00000194970 725 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Gm29813-201ENSMUST00000195856 447 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Sdc1P18828 Gm43105-201ENSMUST00000202987 459 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Gm45269-201ENSMUST00000210359 282 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Gm45359-201ENSMUST00000210635 427 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Sdc1P18828 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Sdc1P18828 AC158803.2-201ENSMUST00000219452 679 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.03□□□□□ -1.76
Sdc1P18828 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sdc1P18828 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sdc1P18828 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sdc1P18828 Gm6065-201ENSMUST00000081336 492 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Gm24032-201ENSMUST00000083932 159 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
Sdc1P18828 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sdc1P18828 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sdc1P18828 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Sdc1P18828 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Sdc1P18828 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Sdc1P18828 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Sdc1P18828 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Sdc1P18828 AC115760.1-201ENSMUST00000225160 1327 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Sdc1P18828 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Sdc1P18828 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Sdc1P18828 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Sdc1P18828 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Mir147-201ENSMUST00000102354 79 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sdc1P18828 Gm24069-201ENSMUST00000104512 127 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
Sdc1P18828 Gm12939-201ENSMUST00000117303 165 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm11533-201ENSMUST00000120287 477 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm15791-201ENSMUST00000120365 319 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm12041-201ENSMUST00000121606 602 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm13724-201ENSMUST00000122395 1155 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.02□□□□□ -1.77
Sdc1P18828 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC4.02□□□□□ -1.77
Sdc1P18828 Gm2182-201ENSMUST00000145243 663 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm25150-201ENSMUST00000157121 60 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm24179-201ENSMUST00000158925 127 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sdc1P18828 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm16456-201ENSMUST00000174431 920 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.02□□□□□ -1.77
Sdc1P18828 Mir7058-201ENSMUST00000184637 75 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm29097-201ENSMUST00000190273 422 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm44376-201ENSMUST00000197570 128 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Mir142-201ENSMUST00000198092 64 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm43233-201ENSMUST00000200491 616 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm43371-201ENSMUST00000202838 1031 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
Sdc1P18828 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Sdc1P18828 Gm44779-201ENSMUST00000206937 708 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm10709-201ENSMUST00000213318 480 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC4.02□□□□□ -1.77
Sdc1P18828 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC4.02□□□□□ -1.77
Sdc1P18828 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 AC154219.1-201ENSMUST00000220764 1262 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 AL671874.1-201ENSMUST00000223746 1123 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 CT025579.4-201ENSMUST00000224598 627 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Cma2-202ENSMUST00000228263 857 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Sdc1P18828 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sdc1P18828 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sdc1P18828 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sdc1P18828 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Sdc1P18828 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Sdc1P18828 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Sdc1P18828 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Sdc1P18828 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.02□□□□□ -1.77
Sdc1P18828 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sdc1P18828 Gm18852-201ENSMUST00000184149 3593 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.02□□□□□ -1.77
Sdc1P18828 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.02□□□□□ -1.77
Sdc1P18828 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Sdc1P18828 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms