Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm23960-201ENSMUST00000157206 131 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Gm25846-201ENSMUST00000158013 135 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
Lire1P11260 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lire1P11260 Gm28353-201ENSMUST00000186482 570 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Gm28533-201ENSMUST00000186741 570 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lire1P11260 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Lire1P11260 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lire1P11260 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lire1P11260 Gm5750-201ENSMUST00000218711 801 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Gm32526-201ENSMUST00000221878 981 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 AC117656.3-205ENSMUST00000224606 1205 ntBASIC5.22□□□□□ -1.57
Lire1P11260 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.22□□□□□ -1.57
Lire1P11260 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Lire1P11260 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Lire1P11260 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lire1P11260 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lire1P11260 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lire1P11260 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lire1P11260 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lire1P11260 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lire1P11260 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Lire1P11260 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Lire1P11260 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
Lire1P11260 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Lire1P11260 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Lire1P11260 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Lire1P11260 Gm11550-201ENSMUST00000118210 699 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC5.21□□□□□ -1.58
Lire1P11260 Gm12577-201ENSMUST00000119701 574 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Gm13533-201ENSMUST00000121104 177 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Gm12293-201ENSMUST00000121898 590 ntBASIC5.21□□□□□ -1.58
Lire1P11260 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.21□□□□□ -1.58
Lire1P11260 Gm22596-201ENSMUST00000157601 316 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.21□□□□□ -1.58
Lire1P11260 Gm21399-201ENSMUST00000180210 597 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC5.21□□□□□ -1.58
Lire1P11260 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Mir7687-201ENSMUST00000184722 59 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Lire1P11260 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.21□□□□□ -1.58
Lire1P11260 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.21□□□□□ -1.58
Lire1P11260 Gm19231-201ENSMUST00000193212 830 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Gm37341-201ENSMUST00000194680 371 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Gm43222-201ENSMUST00000199013 603 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.21□□□□□ -1.58
Lire1P11260 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.21□□□□□ -1.58
Lire1P11260 Gm45701-201ENSMUST00000212049 235 ntBASIC5.21□□□□□ -1.58
Lire1P11260 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.21□□□□□ -1.58
Lire1P11260 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.21□□□□□ -1.58
Lire1P11260 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.21□□□□□ -1.58
Lire1P11260 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.21□□□□□ -1.58
Lire1P11260 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Gm24200-201ENSMUST00000082955 157 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Mir337-201ENSMUST00000083592 97 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Lire1P11260 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Lire1P11260 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.21□□□□□ -1.58
Lire1P11260 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.21□□□□□ -1.58
Lire1P11260 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms