Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm23099-201ENSMUST00000083454 139 ntBASIC5.74□□□□□ -1.49
Col1a1P11087 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col1a1P11087 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.74□□□□□ -1.49
Col1a1P11087 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 Synpr-207ENSMUST00000223583 3362 ntBASIC5.74□□□□□ -1.49
Col1a1P11087 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col1a1P11087 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col1a1P11087 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.73□□□□□ -1.49
Col1a1P11087 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col1a1P11087 Gm14706-201ENSMUST00000117744 255 ntBASIC5.73□□□□□ -1.49
Col1a1P11087 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.73□□□□□ -1.49
Col1a1P11087 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col1a1P11087 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col1a1P11087 Gm24905-201ENSMUST00000158129 104 ntBASIC5.73□□□□□ -1.49
Col1a1P11087 Gm22940-201ENSMUST00000158560 155 ntBASIC5.73□□□□□ -1.49
Col1a1P11087 Gm26362-201ENSMUST00000158865 315 ntBASIC5.73□□□□□ -1.49
Col1a1P11087 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col1a1P11087 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col1a1P11087 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.73□□□□□ -1.49
Col1a1P11087 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col1a1P11087 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col1a1P11087 Gm20428-201ENSMUST00000174365 283 ntBASIC5.73□□□□□ -1.49
Col1a1P11087 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.73□□□□□ -1.49
Col1a1P11087 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.73□□□□□ -1.49
Col1a1P11087 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.73□□□□□ -1.49
Col1a1P11087 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.73□□□□□ -1.49
Col1a1P11087 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.73□□□□□ -1.49
Col1a1P11087 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.73□□□□□ -1.49
Col1a1P11087 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5.73□□□□□ -1.49
Col1a1P11087 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Col1a1P11087 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.73□□□□□ -1.49
Col1a1P11087 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col1a1P11087 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col1a1P11087 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col1a1P11087 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col1a1P11087 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col1a1P11087 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col1a1P11087 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col1a1P11087 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col1a1P11087 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col1a1P11087 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col1a1P11087 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.73□□□□□ -1.49
Col1a1P11087 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col1a1P11087 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.72□□□□□ -1.49
Col1a1P11087 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.72□□□□□ -1.49
Col1a1P11087 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.72□□□□□ -1.49
Col1a1P11087 Gm13503-201ENSMUST00000119017 446 ntBASIC5.72□□□□□ -1.49
Col1a1P11087 Gm25923-201ENSMUST00000158312 138 ntBASIC5.72□□□□□ -1.49
Col1a1P11087 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.72□□□□□ -1.49
Col1a1P11087 Gm10087-201ENSMUST00000167650 330 ntBASIC5.72□□□□□ -1.49
Col1a1P11087 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Gm45722-201ENSMUST00000213075 466 ntBASIC5.72□□□□□ -1.49
Col1a1P11087 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.72□□□□□ -1.49
Col1a1P11087 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.72□□□□□ -1.49
Col1a1P11087 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.72□□□□□ -1.49
Col1a1P11087 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col1a1P11087 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.72□□□□□ -1.49
Col1a1P11087 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Col1a1P11087 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col1a1P11087 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.72□□□□□ -1.49
Col1a1P11087 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.72□□□□□ -1.49
Col1a1P11087 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.72□□□□□ -1.49
Col1a1P11087 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
Col1a1P11087 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col1a1P11087 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.49
Col1a1P11087 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.71□□□□□ -1.49
Col1a1P11087 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col1a1P11087 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Col1a1P11087 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Col1a1P11087 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.71□□□□□ -1.49
Col1a1P11087 Gm16259-201ENSMUST00000145241 553 ntBASIC5.71□□□□□ -1.49
Col1a1P11087 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Col1a1P11087 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col1a1P11087 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.49
Col1a1P11087 Gm44234-201ENSMUST00000204246 900 ntBASIC5.71□□□□□ -1.49
Col1a1P11087 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.71□□□□□ -1.49
Col1a1P11087 Gm18462-201ENSMUST00000208112 417 ntBASIC5.71□□□□□ -1.49
Col1a1P11087 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.71□□□□□ -1.49
Col1a1P11087 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col1a1P11087 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col1a1P11087 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col1a1P11087 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms