Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm14560-201ENSMUST00000118672 375 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm14930-201ENSMUST00000118864 652 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm14125-202ENSMUST00000120921 756 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm25293-201ENSMUST00000122792 285 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm15838-201ENSMUST00000161575 180 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm2497-201ENSMUST00000189539 601 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm38011-201ENSMUST00000193312 279 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm32453-201ENSMUST00000204183 456 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm5418-201ENSMUST00000206932 528 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm6906-201ENSMUST00000218014 569 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Gm13321-201ENSMUST00000117101 400 ntBASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Gm15493-201ENSMUST00000119461 528 ntBASIC5.38□□□□□ -1.55
Chmp6P0C0A3 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Gm28957-201ENSMUST00000190174 373 ntBASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Gm7825-201ENSMUST00000204046 416 ntBASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.38□□□□□ -1.55
Chmp6P0C0A3 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Chmp6P0C0A3 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm14711-201ENSMUST00000117056 217 ntBASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm16149-201ENSMUST00000117631 309 ntBASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm14619-201ENSMUST00000120480 168 ntBASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm15057-201ENSMUST00000121516 534 ntBASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm27528-201ENSMUST00000183544 205 ntBASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm27818-201ENSMUST00000184536 159 ntBASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm27492-201ENSMUST00000185194 187 ntBASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm18800-202ENSMUST00000188688 1105 ntBASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm5842-201ENSMUST00000195073 622 ntBASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm8874-201ENSMUST00000196826 286 ntBASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm42694-201ENSMUST00000196951 358 ntBASIC5.37□□□□□ -1.55
Chmp6P0C0A3 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Chmp6P0C0A3 Gm42983-201ENSMUST00000199879 815 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms