Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm28803-201ENSMUST00000190385 764 ntBASIC4.53□□□□□ -1.68
P06344 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
P06344 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
P06344 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.53□□□□□ -1.68
P06344 Gm18445-201ENSMUST00000195502 774 ntBASIC4.53□□□□□ -1.68
P06344 Gm22897-202ENSMUST00000197782 127 ntBASIC4.53□□□□□ -1.68
P06344 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.53□□□□□ -1.68
P06344 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.53□□□□□ -1.68
P06344 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC4.53□□□□□ -1.68
P06344 Gm43894-201ENSMUST00000203274 688 ntBASIC4.53□□□□□ -1.68
P06344 Gm43974-201ENSMUST00000205080 684 ntBASIC4.53□□□□□ -1.68
P06344 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.53□□□□□ -1.68
P06344 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
P06344 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC4.53□□□□□ -1.68
P06344 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
P06344 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.53□□□□□ -1.68
P06344 AC118230.1-201ENSMUST00000220196 656 ntBASIC4.53□□□□□ -1.68
P06344 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.53□□□□□ -1.68
P06344 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.53□□□□□ -1.68
P06344 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
P06344 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
P06344 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
P06344 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
P06344 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
P06344 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
P06344 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
P06344 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
P06344 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.53□□□□□ -1.68
P06344 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
P06344 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
P06344 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
P06344 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
P06344 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
P06344 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
P06344 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
P06344 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
P06344 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
P06344 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
P06344 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
P06344 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
P06344 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.52□□□□□ -1.69
P06344 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
P06344 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC4.52□□□□□ -1.69
P06344 Gm12685-201ENSMUST00000121702 214 ntBASIC4.52□□□□□ -1.69
P06344 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.52□□□□□ -1.69
P06344 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.52□□□□□ -1.69
P06344 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
P06344 Gm6632-201ENSMUST00000168425 954 ntBASIC4.52□□□□□ -1.69
P06344 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.52□□□□□ -1.69
P06344 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
P06344 Gm27688-201ENSMUST00000183634 91 ntBASIC4.52□□□□□ -1.69
P06344 Gm28660-201ENSMUST00000186496 253 ntBASIC4.52□□□□□ -1.69
P06344 Gm38011-201ENSMUST00000193312 279 ntBASIC4.52□□□□□ -1.69
P06344 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.52□□□□□ -1.69
P06344 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
P06344 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.52□□□□□ -1.69
P06344 Gm44003-201ENSMUST00000203024 490 ntBASIC4.52□□□□□ -1.69
P06344 Gm44261-201ENSMUST00000203337 209 ntBASIC4.52□□□□□ -1.69
P06344 Gm20074-201ENSMUST00000208144 484 ntBASIC4.52□□□□□ -1.69
P06344 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.52□□□□□ -1.69
P06344 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC4.52□□□□□ -1.69
P06344 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
P06344 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.52□□□□□ -1.69
P06344 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.52□□□□□ -1.69
P06344 AC125190.2-201ENSMUST00000221160 497 ntBASIC4.52□□□□□ -1.69
P06344 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
P06344 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
P06344 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
P06344 AC121844.3-201ENSMUST00000219124 1785 ntBASIC4.52□□□□□ -1.69
P06344 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
P06344 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
P06344 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
P06344 Gm38126-201ENSMUST00000195297 4003 ntBASIC4.51□□□□□ -1.69
P06344 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
P06344 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
P06344 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
P06344 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
P06344 Gm11486-201ENSMUST00000107322 478 ntBASIC4.51□□□□□ -1.69
P06344 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
P06344 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.51□□□□□ -1.69
P06344 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
P06344 Gm23965-201ENSMUST00000157969 142 ntBASIC4.51□□□□□ -1.69
P06344 Gm23700-201ENSMUST00000158842 102 ntBASIC4.51□□□□□ -1.69
P06344 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
P06344 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.51□□□□□ -1.69
P06344 Gm22355-201ENSMUST00000175531 96 ntBASIC4.51□□□□□ -1.69
P06344 Gm18953-201ENSMUST00000175694 300 ntBASIC4.51□□□□□ -1.69
P06344 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.51□□□□□ -1.69
P06344 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.51□□□□□ -1.69
P06344 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
P06344 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
P06344 Gm37102-201ENSMUST00000195740 1105 ntBASIC4.51□□□□□ -1.69
P06344 Gm43631-201ENSMUST00000202011 369 ntBASIC4.51□□□□□ -1.69
P06344 Gm32453-201ENSMUST00000204183 456 ntBASIC4.51□□□□□ -1.69
P06344 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
P06344 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.51□□□□□ -1.69
P06344 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
P06344 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.51□□□□□ -1.69
P06344 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
P06344 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms