Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm26607-201ENSMUST00000180661 867 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm28781-201ENSMUST00000185760 696 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm28339-201ENSMUST00000185845 696 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm29574-201ENSMUST00000186226 696 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm28828-201ENSMUST00000186601 696 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm29307-201ENSMUST00000187367 696 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm29634-201ENSMUST00000188467 696 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm28896-201ENSMUST00000188609 696 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm28699-201ENSMUST00000189193 696 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm29339-201ENSMUST00000189613 696 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm28159-201ENSMUST00000190296 696 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm29407-201ENSMUST00000191468 696 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm38107-201ENSMUST00000194873 696 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm44308-201ENSMUST00000197080 99 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm23297-201ENSMUST00000083184 127 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Naip3-201ENSMUST00000118082 4208 ntBASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm43425-201ENSMUST00000201793 3291 ntBASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm13550-201ENSMUST00000118185 525 ntBASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm38263-201ENSMUST00000195879 3059 ntBASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm25104-201ENSMUST00000122476 163 ntBASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm37241-201ENSMUST00000191736 523 ntBASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm9077-201ENSMUST00000210657 2298 ntBASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Ank2-201ENSMUST00000044443 5775 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
Col6a3E9PWQ3 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.71□□□□□ -1.65
Col6a3E9PWQ3 Gm16259-201ENSMUST00000145241 553 ntBASIC4.71□□□□□ -1.65
Col6a3E9PWQ3 Gm24477-201ENSMUST00000157438 103 ntBASIC4.71□□□□□ -1.65
Col6a3E9PWQ3 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.71□□□□□ -1.65
Col6a3E9PWQ3 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Col6a3E9PWQ3 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Col6a3E9PWQ3 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Col6a3E9PWQ3 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Col6a3E9PWQ3 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Col6a3E9PWQ3 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC4.71□□□□□ -1.65
Col6a3E9PWQ3 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
Col6a3E9PWQ3 Gm37766-201ENSMUST00000192244 2567 ntBASIC4.71□□□□□ -1.65
Col6a3E9PWQ3 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Gm22343-201ENSMUST00000122648 286 ntBASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 AC153143.1-201ENSMUST00000222966 1340 ntBASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Gm37914-201ENSMUST00000195317 2679 ntBASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Cox20-ps-201ENSMUST00000119872 353 ntBASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Gm3454-201ENSMUST00000185571 412 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms