Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm43596-201ENSMUST00000202818 884 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm44261-201ENSMUST00000203337 209 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm19596-201ENSMUST00000203685 739 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm45215-201ENSMUST00000206407 395 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm18904-201ENSMUST00000218756 329 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 AC134439.1-201ENSMUST00000220923 600 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 AC165260.4-201ENSMUST00000225924 724 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm25139-201ENSMUST00000083247 210 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm9386-201ENSMUST00000095195 381 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm8358-201ENSMUST00000167222 555 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm6717-201ENSMUST00000185549 838 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm37492-201ENSMUST00000191948 376 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm4410-201ENSMUST00000199349 686 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm44281-201ENSMUST00000203090 166 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm19256-201ENSMUST00000218550 231 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm25187-201ENSMUST00000083906 133 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim3Q9R1R2 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms