Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Mir142-201ENSMUST00000198092 64 ntBASIC6.22□□□□□ -1.41
Trim39Q9ESN2 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Gm19147-201ENSMUST00000199622 652 ntBASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Gm45857-201ENSMUST00000212207 356 ntBASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Gm8275-201ENSMUST00000219732 424 ntBASIC6.22□□□□□ -1.41
Trim39Q9ESN2 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.22□□□□□ -1.41
Trim39Q9ESN2 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim39Q9ESN2 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.21□□□□□ -1.41
Trim39Q9ESN2 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Trim39Q9ESN2 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.21□□□□□ -1.41
Trim39Q9ESN2 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Trim39Q9ESN2 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Trim39Q9ESN2 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Trim39Q9ESN2 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Trim39Q9ESN2 Gm7451-201ENSMUST00000208382 1392 ntBASIC6.21□□□□□ -1.41
Trim39Q9ESN2 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Trim39Q9ESN2 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
Trim39Q9ESN2 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Mir678-201ENSMUST00000102114 84 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm26419-201ENSMUST00000104272 133 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm13733-201ENSMUST00000117290 535 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm15901-201ENSMUST00000117663 941 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm14987-201ENSMUST00000117820 676 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm14082-201ENSMUST00000118582 801 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm9005-201ENSMUST00000119908 607 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Clec2f-201ENSMUST00000121051 374 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm12267-201ENSMUST00000121609 761 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm25969-201ENSMUST00000157166 132 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm24442-201ENSMUST00000157238 327 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm23542-201ENSMUST00000158208 96 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm17217-201ENSMUST00000166613 469 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm4134-201ENSMUST00000173244 563 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Mir5106-201ENSMUST00000174936 73 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm25640-201ENSMUST00000175378 125 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Mir8114-201ENSMUST00000183582 111 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm27266-201ENSMUST00000184521 123 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm28580-201ENSMUST00000186767 88 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm18875-201ENSMUST00000188563 882 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 CT030182.3-201ENSMUST00000225986 582 ntBASIC6.21□□□□□ -1.42
Trim39Q9ESN2 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim39Q9ESN2 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms