Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm37789-201ENSMUST00000192862 2889 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Fus-202ENSMUST00000079045 2623 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm18194-202ENSMUST00000210952 3442 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm3940-201ENSMUST00000105087 432 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm12492-201ENSMUST00000117665 564 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm15766-201ENSMUST00000118025 813 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm13013-201ENSMUST00000119087 523 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm11352-201ENSMUST00000119264 517 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm15237-201ENSMUST00000122104 469 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm16259-201ENSMUST00000145241 553 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm27313-201ENSMUST00000183500 142 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm17906-201ENSMUST00000202480 901 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm44002-201ENSMUST00000205134 594 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm6850-201ENSMUST00000210031 530 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm45722-201ENSMUST00000213075 466 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 AC109212.1-201ENSMUST00000215561 427 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 AC131720.2-201ENSMUST00000220420 431 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 AC160931.2-201ENSMUST00000221445 351 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm46994-201ENSMUST00000221523 219 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm24623-201ENSMUST00000082616 194 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.74□□□□□ -1.33
Clp1Q99LI9 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clp1Q99LI9 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm12901-201ENSMUST00000118690 532 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms