Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Gm12520-201ENSMUST00000117493 316 ntBASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Gm7657-201ENSMUST00000118851 666 ntBASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Gm11447-201ENSMUST00000118983 858 ntBASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Gm24444-201ENSMUST00000157244 308 ntBASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Gm17952-201ENSMUST00000193914 747 ntBASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Gm32308-201ENSMUST00000203053 280 ntBASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Gm18205-201ENSMUST00000209215 841 ntBASIC5.16□□□□□ -1.58
Cstf1Q99LC2 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.16□□□□□ -1.58
Cstf1Q99LC2 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.16□□□□□ -1.58
Cstf1Q99LC2 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cstf1Q99LC2 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cstf1Q99LC2 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm14304-201ENSMUST00000117272 446 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm11878-201ENSMUST00000117908 400 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm3931-201ENSMUST00000119038 455 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm14876-201ENSMUST00000120795 327 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm15168-201ENSMUST00000121057 316 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm23069-201ENSMUST00000158240 311 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm27148-201ENSMUST00000185086 160 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm18558-201ENSMUST00000186253 1214 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm38040-201ENSMUST00000193505 225 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm37670-201ENSMUST00000193622 229 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm6366-201ENSMUST00000198766 826 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm8719-201ENSMUST00000203602 534 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm45789-201ENSMUST00000213038 364 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm45722-201ENSMUST00000213075 466 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 AC154634.3-201ENSMUST00000224589 736 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm6863-201ENSMUST00000052882 636 ntBASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cstf1Q99LC2 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Mir546-201ENSMUST00000102105 121 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm26300-201ENSMUST00000102282 94 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm11270-201ENSMUST00000117685 471 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm15772-201ENSMUST00000118533 438 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Mir5128-201ENSMUST00000175217 84 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm6223-201ENSMUST00000178436 871 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm27760-201ENSMUST00000185048 114 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms