Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm14981-201ENSMUST00000117325 943 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm15001-201ENSMUST00000117657 795 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm11902-201ENSMUST00000118849 270 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm11913-201ENSMUST00000119094 336 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm7309-201ENSMUST00000121670 581 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm14212-201ENSMUST00000122023 826 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm15111-201ENSMUST00000122142 878 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm23995-201ENSMUST00000158060 129 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm24767-201ENSMUST00000158509 95 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm15970-201ENSMUST00000160623 834 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm17177-201ENSMUST00000169144 483 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm9587-201ENSMUST00000172449 454 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm24103-201ENSMUST00000174930 77 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm18396-201ENSMUST00000177095 361 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm9457-201ENSMUST00000180176 372 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Mir8118-201ENSMUST00000183962 129 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm27636-201ENSMUST00000184528 122 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm28594-201ENSMUST00000187022 661 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm20940-201ENSMUST00000197308 360 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm18592-201ENSMUST00000221529 276 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.53□□□□□ -1.52
Clrn1Q8K445 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.53□□□□□ -1.52
Clrn1Q8K445 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm23739-201ENSMUST00000102295 108 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm15108-201ENSMUST00000116160 803 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm13772-201ENSMUST00000118431 317 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm14607-201ENSMUST00000119119 491 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm13751-201ENSMUST00000120280 752 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm13489-201ENSMUST00000121234 971 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm11344-201ENSMUST00000122011 335 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm6568-201ENSMUST00000122274 697 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm23212-201ENSMUST00000122718 60 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm26106-201ENSMUST00000157254 228 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm10177-201ENSMUST00000160052 444 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm28094-201ENSMUST00000185262 390 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm412-201ENSMUST00000193360 948 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm42622-201ENSMUST00000197229 355 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm43467-201ENSMUST00000197441 437 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm9173-201ENSMUST00000198054 400 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm18327-201ENSMUST00000202426 830 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm43105-201ENSMUST00000202987 459 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm45156-201ENSMUST00000207255 439 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm6702-201ENSMUST00000208496 471 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.52□□□□□ -1.53
Clrn1Q8K445 AC124399.1-201ENSMUST00000218334 590 ntBASIC5.52□□□□□ -1.53
Clrn1Q8K445 Gm19599-201ENSMUST00000218898 358 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms