Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.97□□□□□ -1.61
Ccdc28bQ8CEG5 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.97□□□□□ -1.61
Ccdc28bQ8CEG5 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ccdc28bQ8CEG5 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ccdc28bQ8CEG5 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.96□□□□□ -1.61
Ccdc28bQ8CEG5 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm19210-201ENSMUST00000199562 1350 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 n-R5s172-201ENSMUST00000104508 114 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm15791-201ENSMUST00000120365 319 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm14369-201ENSMUST00000121355 285 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm25176-201ENSMUST00000122640 125 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm22223-201ENSMUST00000157360 125 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm29013-201ENSMUST00000187431 237 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm2427-201ENSMUST00000189121 881 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm18426-201ENSMUST00000191874 973 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm44376-201ENSMUST00000197570 128 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 AC154828.2-201ENSMUST00000220908 1070 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 AC157572.4-201ENSMUST00000228203 549 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 AC133203.1-201ENSMUST00000228241 301 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 AC115760.1-201ENSMUST00000225160 1327 ntBASIC4.96□□□□□ -1.62
Ccdc28bQ8CEG5 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm13771-201ENSMUST00000117988 238 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm11962-201ENSMUST00000145746 255 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm25117-201ENSMUST00000157194 144 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm27528-201ENSMUST00000183544 205 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm27225-201ENSMUST00000183833 557 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm29663-201ENSMUST00000186962 853 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm29376-201ENSMUST00000189357 835 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm10925-201ENSMUST00000189941 678 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm10048-201ENSMUST00000194196 372 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm19030-201ENSMUST00000194947 552 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm4410-201ENSMUST00000199349 686 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 AC154562.1-201ENSMUST00000226140 966 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 AC164295.2-201ENSMUST00000228539 757 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ccdc28bQ8CEG5 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms