Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Nup88Q8CEC0 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.98□□□□□ -1.45
Nup88Q8CEC0 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.98□□□□□ -1.45
Nup88Q8CEC0 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Nup88Q8CEC0 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Nup88Q8CEC0 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm37470-201ENSMUST00000193378 2798 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm24160-201ENSMUST00000104594 126 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm6620-201ENSMUST00000120113 715 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm11759-201ENSMUST00000121742 464 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm12317-201ENSMUST00000122307 319 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm16060-201ENSMUST00000153140 478 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm23513-201ENSMUST00000158181 133 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm3053-201ENSMUST00000161709 616 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm5285-201ENSMUST00000193089 666 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm43408-201ENSMUST00000198263 440 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm6366-201ENSMUST00000198766 826 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm43974-201ENSMUST00000205080 684 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm20074-201ENSMUST00000208144 484 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Gm23972-201ENSMUST00000083322 165 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Mir342-201ENSMUST00000083502 99 ntBASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.97□□□□□ -1.45
Nup88Q8CEC0 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Nup88Q8CEC0 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Nup88Q8CEC0 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.45
Nup88Q8CEC0 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm15670-201ENSMUST00000117740 447 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm25907-201ENSMUST00000158486 125 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm24561-201ENSMUST00000175182 95 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm27688-201ENSMUST00000183634 91 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm28060-201ENSMUST00000191554 189 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm44237-201ENSMUST00000205183 936 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm17766-201ENSMUST00000209223 442 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Mir20a-201ENSMUST00000083508 107 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Mir17-201ENSMUST00000083574 84 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup88Q8CEC0 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.95□□□□□ -1.46
Nup88Q8CEC0 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup88Q8CEC0 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Nup88Q8CEC0 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup88Q8CEC0 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Nup88Q8CEC0 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Nup88Q8CEC0 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Nup88Q8CEC0 Gm7973-201ENSMUST00000122107 488 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms