Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm18177-201ENSMUST00000188373 404 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm43842-201ENSMUST00000202890 2982 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 AC121997.2-201ENSMUST00000228095 2294 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Gm37057-201ENSMUST00000192624 1916 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Gm12231-201ENSMUST00000119447 695 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Gm7449-201ENSMUST00000194393 663 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Gm42819-201ENSMUST00000199630 5121 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Gm18757-201ENSMUST00000207938 3141 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Gm14750-201ENSMUST00000118262 516 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Gm14560-201ENSMUST00000118672 375 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Gm13815-201ENSMUST00000119963 412 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Gm16107-201ENSMUST00000162523 862 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col6a6Q8C6K9 Gm37049-201ENSMUST00000194356 1983 ntBASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm43363-201ENSMUST00000201590 2647 ntBASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm14086-201ENSMUST00000117152 173 ntBASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm12427-201ENSMUST00000117719 302 ntBASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm12413-201ENSMUST00000121508 312 ntBASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm22326-201ENSMUST00000158897 351 ntBASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm4602-201ENSMUST00000203198 308 ntBASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm45081-201ENSMUST00000206281 572 ntBASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm18940-201ENSMUST00000222518 871 ntBASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm12852-201ENSMUST00000119478 719 ntBASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a6Q8C6K9 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Col6a6Q8C6K9 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.36□□□□□ -1.71
Col6a6Q8C6K9 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms