Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm42502-201ENSMUST00000198550 1089 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm44074-201ENSMUST00000204562 337 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm18599-201ENSMUST00000206729 1125 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm44776-201ENSMUST00000207212 381 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 AC160031.1-201ENSMUST00000219914 522 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm43437-201ENSMUST00000198535 3955 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm6300-201ENSMUST00000192393 1498 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm37076-201ENSMUST00000192033 2294 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm43567-201ENSMUST00000197581 1978 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm23274-201ENSMUST00000104056 130 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm8569-201ENSMUST00000117630 647 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm12819-201ENSMUST00000122223 629 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Mir3473c-201ENSMUST00000175262 81 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm8614-201ENSMUST00000182528 978 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm38061-201ENSMUST00000192490 365 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm37445-201ENSMUST00000195318 242 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm43967-201ENSMUST00000203787 301 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm45382-201ENSMUST00000210607 151 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm5374-202ENSMUST00000222910 314 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 AC144628.1-201ENSMUST00000227943 466 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 AC125523.1-201ENSMUST00000228018 934 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Mir342-201ENSMUST00000083502 99 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm44242-201ENSMUST00000204212 2721 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Gm45819-201ENSMUST00000210940 1751 ntBASIC7.41□□□□□ -1.22
Usp40Q8BWR4 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm42676-201ENSMUST00000197609 2686 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm16089-201ENSMUST00000117679 336 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm16458-201ENSMUST00000121428 502 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm16589-201ENSMUST00000159522 918 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm16563-201ENSMUST00000162673 423 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm26991-201ENSMUST00000180950 620 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Mir7012-201ENSMUST00000183900 64 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm28688-201ENSMUST00000187301 268 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm29489-201ENSMUST00000188934 324 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm28927-201ENSMUST00000191528 272 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm37578-201ENSMUST00000192256 1177 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm9173-201ENSMUST00000198054 400 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm43431-201ENSMUST00000198577 340 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm19649-201ENSMUST00000201126 822 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm45731-201ENSMUST00000211988 1203 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm18892-201ENSMUST00000217628 881 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms