Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm24940-201ENSMUST00000158326 108 ntBASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm28118-201ENSMUST00000185957 294 ntBASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm44221-201ENSMUST00000203552 388 ntBASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm19095-201ENSMUST00000220533 730 ntBASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm14885-201ENSMUST00000117969 496 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm14985-201ENSMUST00000118693 786 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm23441-201ENSMUST00000157268 127 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Scarna13-201ENSMUST00000158164 275 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm8256-201ENSMUST00000169178 453 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm19791-201ENSMUST00000180398 859 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm27960-201ENSMUST00000183445 184 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm29552-201ENSMUST00000190548 660 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm18445-201ENSMUST00000195502 774 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm9332-201ENSMUST00000198431 730 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm3148-201ENSMUST00000203594 612 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm19039-201ENSMUST00000204363 575 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm4057-201ENSMUST00000221407 368 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm5457-201ENSMUST00000022260 333 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Mir20a-201ENSMUST00000083508 107 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 AC154548.1-201ENSMUST00000225844 3838 ntBASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.37□□□□□ -1.55
Ccdc40Q8BI79 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm14385-201ENSMUST00000116315 876 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm14220-201ENSMUST00000118114 449 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm12074-201ENSMUST00000120189 219 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm12444-201ENSMUST00000121512 877 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm25176-201ENSMUST00000122640 125 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm10784-201ENSMUST00000178715 238 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm28943-201ENSMUST00000186187 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm28736-201ENSMUST00000186257 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm29401-201ENSMUST00000186690 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm29178-204ENSMUST00000186784 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm28589-201ENSMUST00000186991 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm28936-201ENSMUST00000187153 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm29121-201ENSMUST00000187611 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm28243-201ENSMUST00000187801 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm29668-201ENSMUST00000187802 315 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm28844-202ENSMUST00000187977 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm18177-201ENSMUST00000188373 404 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms