Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Gm23972-201ENSMUST00000083322 165 ntBASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Olfr654-201ENSMUST00000098173 1155 ntBASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Gm7648-201ENSMUST00000173036 1658 ntBASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 AC149294.7-201ENSMUST00000227475 1432 ntBASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Ddx55Q6ZPL9 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm14388-201ENSMUST00000118119 477 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm14989-201ENSMUST00000120497 207 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm12748-201ENSMUST00000120763 504 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm15057-201ENSMUST00000121516 534 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm19214-201ENSMUST00000191956 1083 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm17952-201ENSMUST00000193914 747 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm37987-201ENSMUST00000194999 825 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm45382-201ENSMUST00000210607 151 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm18892-201ENSMUST00000217628 881 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 AC123064.1-201ENSMUST00000218950 406 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 AC173345.3-201ENSMUST00000221245 1093 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm23626-201ENSMUST00000082458 133 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm25147-201ENSMUST00000083030 105 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.24□□□□□ -1.41
Ddx55Q6ZPL9 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Gm22870-201ENSMUST00000157501 112 ntBASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Gm4845-201ENSMUST00000179202 562 ntBASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx55Q6ZPL9 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms