Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 AC102575.1-201ENSMUST00000225348 547 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Sh3rf1Q69ZI1 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.34□□□□□ -1.4
Sh3rf1Q69ZI1 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm23311-201ENSMUST00000104152 134 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm26146-201ENSMUST00000104478 185 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm16400-201ENSMUST00000116523 1029 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm26156-201ENSMUST00000116999 123 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm5287-201ENSMUST00000120666 598 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm14919-201ENSMUST00000120839 390 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm13593-201ENSMUST00000121329 692 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm11925-201ENSMUST00000121375 535 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm4660-201ENSMUST00000131499 403 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm25342-201ENSMUST00000157459 122 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm23754-201ENSMUST00000157576 63 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm23024-201ENSMUST00000158770 292 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm24741-201ENSMUST00000158857 106 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm23003-201ENSMUST00000179948 107 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Mir7093-201ENSMUST00000184195 101 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm28149-201ENSMUST00000187102 378 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm28768-201ENSMUST00000189034 378 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm29552-201ENSMUST00000190548 660 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm44265-201ENSMUST00000203631 465 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm5027-201ENSMUST00000206700 375 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm45485-201ENSMUST00000211229 357 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm9685-201ENSMUST00000211275 538 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm9535-201ENSMUST00000218499 768 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Sh3rf1Q69ZI1 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms