Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm43968-201ENSMUST00000203388 389 ntBASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm2522-201ENSMUST00000204280 322 ntBASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm10936-201ENSMUST00000105264 252 ntBASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm25913-201ENSMUST00000157617 135 ntBASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm27568-201ENSMUST00000184220 99 ntBASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm18382-201ENSMUST00000194394 582 ntBASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm45343-201ENSMUST00000210452 828 ntBASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc88aQ5SNZ0 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ccdc88aQ5SNZ0 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ccdc88aQ5SNZ0 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Ccdc88aQ5SNZ0 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ccdc88aQ5SNZ0 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm24931-201ENSMUST00000158324 107 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm3084-201ENSMUST00000169967 598 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm27834-201ENSMUST00000183427 125 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm11360-201ENSMUST00000221898 262 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 AC134860.6-201ENSMUST00000226038 285 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm24544-201ENSMUST00000103862 110 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm7312-201ENSMUST00000118798 469 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm11822-201ENSMUST00000119177 415 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm12231-201ENSMUST00000119447 695 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm26490-201ENSMUST00000157879 140 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm29196-201ENSMUST00000189239 618 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm9512-201ENSMUST00000223112 497 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.71□□□□□ -1.5
Ccdc88aQ5SNZ0 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 118.1 ms