Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm14500-201ENSMUST00000121647 113 ntBASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm25923-201ENSMUST00000158312 138 ntBASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm23860-201ENSMUST00000179446 132 ntBASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm9569-201ENSMUST00000187492 787 ntBASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm18537-201ENSMUST00000205709 989 ntBASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm44742-201ENSMUST00000207190 1412 ntBASIC6.12□□□□□ -1.43
Shank3Q4ACU6 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm37764-201ENSMUST00000194664 2150 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm14750-201ENSMUST00000118262 516 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm13815-201ENSMUST00000119963 412 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm13220-201ENSMUST00000121535 508 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm28390-201ENSMUST00000185212 700 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm19214-201ENSMUST00000191956 1083 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm18258-201ENSMUST00000210413 542 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm25140-201ENSMUST00000083254 140 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm38125-201ENSMUST00000194136 3438 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm15263-201ENSMUST00000121556 642 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm23905-201ENSMUST00000157568 109 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm26005-201ENSMUST00000158802 134 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm28654-201ENSMUST00000189801 379 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm37243-201ENSMUST00000193407 595 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm44402-201ENSMUST00000203677 238 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm4501-201ENSMUST00000207330 551 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm44820-201ENSMUST00000207420 396 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm4558-201ENSMUST00000207886 521 ntBASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Shank3Q4ACU6 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Gm43426-201ENSMUST00000197287 2597 ntBASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Gm44518-201ENSMUST00000208080 4370 ntBASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Gm29112-201ENSMUST00000188962 3487 ntBASIC6.1□□□□□ -1.43
Shank3Q4ACU6 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Gm22940-201ENSMUST00000158560 155 ntBASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 AC125484.1-201ENSMUST00000223218 234 ntBASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Svet1-201ENSMUST00000209370 3940 ntBASIC6.1□□□□□ -1.43
Shank3Q4ACU6 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Shank3Q4ACU6 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Shank3Q4ACU6 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Shank3Q4ACU6 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC6.09□□□□□ -1.43
Shank3Q4ACU6 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Shank3Q4ACU6 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms