Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm25074-201ENSMUST00000178782 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm25210-201ENSMUST00000178813 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm25157-201ENSMUST00000178914 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm23313-201ENSMUST00000178931 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l17-201ENSMUST00000178936 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm23089-201ENSMUST00000178947 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm22046-201ENSMUST00000179027 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l10-201ENSMUST00000179053 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm26365-201ENSMUST00000179177 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm23767-201ENSMUST00000179278 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm24153-201ENSMUST00000179280 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm25597-201ENSMUST00000179388 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l1-201ENSMUST00000179518 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm22941-201ENSMUST00000179630 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm22631-201ENSMUST00000179656 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm25816-201ENSMUST00000179764 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l12-201ENSMUST00000179816 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l14-201ENSMUST00000179875 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l8-201ENSMUST00000179889 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l7-201ENSMUST00000179895 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l5-201ENSMUST00000179927 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l6-201ENSMUST00000179955 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm26188-201ENSMUST00000179963 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm25471-201ENSMUST00000180126 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm26433-201ENSMUST00000180227 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l11-201ENSMUST00000180312 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm23862-201ENSMUST00000180342 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm22128-201ENSMUST00000180346 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm8192-201ENSMUST00000182196 958 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm27013-201ENSMUST00000182441 1024 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.31□□□□□ -1.56
Col8a1Q00780 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm19457-201ENSMUST00000200995 448 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm44225-201ENSMUST00000203582 186 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm44754-201ENSMUST00000208155 400 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm18127-201ENSMUST00000208479 725 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm7948-201ENSMUST00000212607 844 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm37474-201ENSMUST00000194812 1814 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm10845-202ENSMUST00000228217 3389 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm11105-201ENSMUST00000112781 478 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms