Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm21839-201ENSMUST00000179536 378 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm17222-201ENSMUST00000180135 847 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Mir6951-201ENSMUST00000183910 75 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Mir7033-201ENSMUST00000184259 81 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm29552-201ENSMUST00000190548 660 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm37353-201ENSMUST00000194497 313 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm37477-201ENSMUST00000195215 884 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm29778-201ENSMUST00000201667 466 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm6009-201ENSMUST00000210848 280 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm45628-201ENSMUST00000210849 274 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC5.62□□□□□ -1.51
Sf3b6P59708 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm4921-201ENSMUST00000219804 992 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 AC154558.1-201ENSMUST00000222278 415 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm4808-201ENSMUST00000222283 1203 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 AC124395.1-201ENSMUST00000225940 707 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3b6P59708 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm22810-201ENSMUST00000082741 158 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm7690-201ENSMUST00000190885 1399 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sf3b6P59708 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3b6P59708 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.62□□□□□ -1.51
Sf3b6P59708 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3b6P59708 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sf3b6P59708 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3b6P59708 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3b6P59708 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3b6P59708 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.62□□□□□ -1.51
Sf3b6P59708 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC5.61□□□□□ -1.51
Sf3b6P59708 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sf3b6P59708 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sf3b6P59708 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sf3b6P59708 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm3940-201ENSMUST00000105087 432 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm15087-201ENSMUST00000117465 1172 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm12375-201ENSMUST00000119331 921 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm15311-201ENSMUST00000119682 282 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm12174-201ENSMUST00000119853 813 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm15305-201ENSMUST00000120354 288 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm12152-201ENSMUST00000122465 684 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.61□□□□□ -1.51
Sf3b6P59708 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm15946-201ENSMUST00000160654 423 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC5.61□□□□□ -1.51
Sf3b6P59708 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Sf3b6P59708 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm23632-201ENSMUST00000175289 125 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm10568-201ENSMUST00000193244 1634 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm43370-201ENSMUST00000196437 284 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm43546-201ENSMUST00000196721 943 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm43070-201ENSMUST00000196938 415 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm43148-201ENSMUST00000198237 520 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm5284-201ENSMUST00000199053 903 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm43089-201ENSMUST00000199162 275 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC5.61□□□□□ -1.51
Sf3b6P59708 AC099934.1-201ENSMUST00000200493 79 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm42713-201ENSMUST00000202709 945 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm45136-201ENSMUST00000205793 943 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sf3b6P59708 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sf3b6P59708 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.61□□□□□ -1.51
Sf3b6P59708 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.61□□□□□ -1.51
Sf3b6P59708 Gm31711-201ENSMUST00000220687 196 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms