Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm36986-201ENSMUST00000195320 353 ntBASIC4.9□□□□□ -1.63
Sox3P53784 Gm43895-201ENSMUST00000203219 855 ntBASIC4.9□□□□□ -1.63
Sox3P53784 Gm8719-201ENSMUST00000203602 534 ntBASIC4.9□□□□□ -1.63
Sox3P53784 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.9□□□□□ -1.63
Sox3P53784 Gm44580-201ENSMUST00000206333 877 ntBASIC4.9□□□□□ -1.63
Sox3P53784 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC4.9□□□□□ -1.63
Sox3P53784 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.9□□□□□ -1.63
Sox3P53784 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.9□□□□□ -1.63
Sox3P53784 AC134860.4-201ENSMUST00000223592 978 ntBASIC4.9□□□□□ -1.63
Sox3P53784 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.9□□□□□ -1.63
Sox3P53784 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Sox3P53784 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sox3P53784 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sox3P53784 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sox3P53784 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sox3P53784 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sox3P53784 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Sox3P53784 Gm42658-201ENSMUST00000197199 1575 ntBASIC4.9□□□□□ -1.63
Sox3P53784 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sox3P53784 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sox3P53784 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sox3P53784 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Sox3P53784 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.9□□□□□ -1.63
Sox3P53784 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Sox3P53784 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Sox3P53784 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sox3P53784 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Sox3P53784 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 Gm37181-201ENSMUST00000192513 1727 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Sox3P53784 Gm25418-201ENSMUST00000104214 129 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC4.89□□□□□ -1.63
Sox3P53784 Gm11633-201ENSMUST00000118176 444 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Gm25176-201ENSMUST00000122640 125 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.89□□□□□ -1.63
Sox3P53784 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Sox3P53784 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Sox3P53784 Gm23162-201ENSMUST00000175081 121 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC4.89□□□□□ -1.63
Sox3P53784 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Sox3P53784 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sox3P53784 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Sox3P53784 Gm6717-201ENSMUST00000185549 838 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Gm18177-201ENSMUST00000188373 404 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Gm28116-201ENSMUST00000189064 387 ntBASIC4.89□□□□□ -1.63
Sox3P53784 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.89□□□□□ -1.63
Sox3P53784 Gm37908-201ENSMUST00000195828 470 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 Gm19104-201ENSMUST00000198392 679 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
Sox3P53784 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.89□□□□□ -1.63
Sox3P53784 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.89□□□□□ -1.63
Sox3P53784 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Gm45359-201ENSMUST00000210635 427 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 Gm25139-201ENSMUST00000083247 210 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Gm23796-201ENSMUST00000084011 160 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
Sox3P53784 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sox3P53784 Gm43437-201ENSMUST00000198535 3955 ntBASIC4.89□□□□□ -1.63
Sox3P53784 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Sox3P53784 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Sox3P53784 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.89□□□□□ -1.63
Sox3P53784 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sox3P53784 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sox3P53784 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Sox3P53784 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sox3P53784 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Sox3P53784 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Sox3P53784 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sox3P53784 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sox3P53784 AC131586.2-202ENSMUST00000227016 2705 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sox3P53784 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Sox3P53784 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sox3P53784 Gm15185-201ENSMUST00000117397 746 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Gm13503-201ENSMUST00000119017 446 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Gm12731-201ENSMUST00000120932 268 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Gm12413-201ENSMUST00000121508 312 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Gm25843-201ENSMUST00000122582 314 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Gm16589-201ENSMUST00000159522 918 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Gm15790-201ENSMUST00000161109 1251 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Gm16114-201ENSMUST00000161930 300 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 473.5 ms