Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Mir1193-201ENSMUST00000116761 121 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col2a1P28481 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col2a1P28481 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.58□□□□□ -1.52
Col2a1P28481 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.58□□□□□ -1.52
Col2a1P28481 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.58□□□□□ -1.52
Col2a1P28481 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 AC102542.1-201ENSMUST00000225204 1138 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col2a1P28481 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col2a1P28481 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col2a1P28481 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col2a1P28481 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col2a1P28481 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col2a1P28481 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col2a1P28481 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col2a1P28481 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.58□□□□□ -1.52
Col2a1P28481 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col2a1P28481 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col2a1P28481 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col2a1P28481 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.58□□□□□ -1.52
Col2a1P28481 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col2a1P28481 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col2a1P28481 Gm12112-201ENSMUST00000117772 231 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 Gm13737-201ENSMUST00000119793 232 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 Gm11584-201ENSMUST00000120636 325 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 Gm23906-201ENSMUST00000157573 128 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col2a1P28481 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.58□□□□□ -1.52
Col2a1P28481 Gm29781-201ENSMUST00000203862 478 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 Gm23300-201ENSMUST00000082712 125 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.58□□□□□ -1.52
Col2a1P28481 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col2a1P28481 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col2a1P28481 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col2a1P28481 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col2a1P28481 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col2a1P28481 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col2a1P28481 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col2a1P28481 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col2a1P28481 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col2a1P28481 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Col2a1P28481 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col2a1P28481 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col2a1P28481 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col2a1P28481 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Col2a1P28481 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Col2a1P28481 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col2a1P28481 Gm16082-201ENSMUST00000115992 377 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col2a1P28481 Gm12231-201ENSMUST00000119447 695 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 Gm13808-201ENSMUST00000121353 184 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.57□□□□□ -1.52
Col2a1P28481 Mir7074-201ENSMUST00000183884 63 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.57□□□□□ -1.52
Col2a1P28481 Gm23925-202ENSMUST00000188429 132 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 Gm5734-201ENSMUST00000189787 913 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.57□□□□□ -1.52
Col2a1P28481 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.57□□□□□ -1.52
Col2a1P28481 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.57□□□□□ -1.52
Col2a1P28481 Gm44816-201ENSMUST00000206666 477 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 Gm45651-201ENSMUST00000210857 335 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.57□□□□□ -1.52
Col2a1P28481 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col2a1P28481 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col2a1P28481 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col2a1P28481 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Col2a1P28481 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col2a1P28481 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.57□□□□□ -1.52
Col2a1P28481 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col2a1P28481 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col2a1P28481 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Col2a1P28481 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col2a1P28481 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col2a1P28481 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.56□□□□□ -1.52
Col2a1P28481 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col2a1P28481 Gm11633-201ENSMUST00000118176 444 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 Gm12237-201ENSMUST00000120158 470 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 Gm6062-201ENSMUST00000120462 631 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col2a1P28481 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.56□□□□□ -1.52
Col2a1P28481 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col2a1P28481 Zakit-201ENSMUST00000157677 308 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms