Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.49□□□□□ -1.69
P20040 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
P20040 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
P20040 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
P20040 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
P20040 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.49□□□□□ -1.69
P20040 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.49□□□□□ -1.69
P20040 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.49□□□□□ -1.69
P20040 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC4.49□□□□□ -1.69
P20040 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
P20040 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
P20040 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
P20040 Gm25824-201ENSMUST00000157092 121 ntBASIC4.49□□□□□ -1.69
P20040 Gm23116-201ENSMUST00000158481 67 ntBASIC4.49□□□□□ -1.69
P20040 Gm10319-202ENSMUST00000159439 846 ntBASIC4.49□□□□□ -1.69
P20040 Gm16566-201ENSMUST00000160387 910 ntBASIC4.49□□□□□ -1.69
P20040 Gm19029-201ENSMUST00000189923 564 ntBASIC4.49□□□□□ -1.69
P20040 Gm28803-201ENSMUST00000190385 764 ntBASIC4.49□□□□□ -1.69
P20040 Gm29454-201ENSMUST00000190805 393 ntBASIC4.49□□□□□ -1.69
P20040 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.49□□□□□ -1.69
P20040 Gm18036-201ENSMUST00000195256 272 ntBASIC4.49□□□□□ -1.69
P20040 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
P20040 Gm42542-201ENSMUST00000197978 268 ntBASIC4.49□□□□□ -1.69
P20040 Gm18330-201ENSMUST00000199246 547 ntBASIC4.49□□□□□ -1.69
P20040 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
P20040 Gm44281-201ENSMUST00000203090 166 ntBASIC4.49□□□□□ -1.69
P20040 Gm44048-201ENSMUST00000204531 361 ntBASIC4.49□□□□□ -1.69
P20040 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC4.49□□□□□ -1.69
P20040 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.49□□□□□ -1.69
P20040 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.49□□□□□ -1.69
P20040 Gm18904-201ENSMUST00000218756 329 ntBASIC4.49□□□□□ -1.69
P20040 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.49□□□□□ -1.69
P20040 AC160031.1-201ENSMUST00000219914 522 ntBASIC4.49□□□□□ -1.69
P20040 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
P20040 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.49□□□□□ -1.69
P20040 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
P20040 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
P20040 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
P20040 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
P20040 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
P20040 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.49□□□□□ -1.69
P20040 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
P20040 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
P20040 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.49□□□□□ -1.69
P20040 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
P20040 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
P20040 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
P20040 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.49□□□□□ -1.69
P20040 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
P20040 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
P20040 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
P20040 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
P20040 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
P20040 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.49□□□□□ -1.69
P20040 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.49□□□□□ -1.69
P20040 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.48□□□□□ -1.69
P20040 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
P20040 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
P20040 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
P20040 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
P20040 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.48□□□□□ -1.69
P20040 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
P20040 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
P20040 Gm24429-201ENSMUST00000104076 132 ntBASIC4.48□□□□□ -1.69
P20040 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
P20040 Gm13195-201ENSMUST00000117229 261 ntBASIC4.48□□□□□ -1.69
P20040 Gm16205-201ENSMUST00000117720 1027 ntBASIC4.48□□□□□ -1.69
P20040 Gm12717-201ENSMUST00000118427 983 ntBASIC4.48□□□□□ -1.69
P20040 Gm11200-201ENSMUST00000121698 448 ntBASIC4.48□□□□□ -1.69
P20040 Gm13738-201ENSMUST00000122437 469 ntBASIC4.48□□□□□ -1.69
P20040 Gm25843-201ENSMUST00000122582 314 ntBASIC4.48□□□□□ -1.69
P20040 Gm25176-201ENSMUST00000122640 125 ntBASIC4.48□□□□□ -1.69
P20040 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
P20040 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
P20040 Gm23318-201ENSMUST00000158000 108 ntBASIC4.48□□□□□ -1.69
P20040 Gm25907-201ENSMUST00000158486 125 ntBASIC4.48□□□□□ -1.69
P20040 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
P20040 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
P20040 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC4.48□□□□□ -1.69
P20040 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC4.48□□□□□ -1.69
P20040 Gm37293-201ENSMUST00000191658 295 ntBASIC4.48□□□□□ -1.69
P20040 Gm37421-201ENSMUST00000193088 132 ntBASIC4.48□□□□□ -1.69
P20040 Gm43712-201ENSMUST00000198020 291 ntBASIC4.48□□□□□ -1.69
P20040 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
P20040 Gm18215-201ENSMUST00000204429 798 ntBASIC4.48□□□□□ -1.69
P20040 Gm20946-201ENSMUST00000212367 461 ntBASIC4.48□□□□□ -1.69
P20040 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.48□□□□□ -1.69
P20040 AC158142.3-201ENSMUST00000226230 675 ntBASIC4.48□□□□□ -1.69
P20040 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.48□□□□□ -1.69
P20040 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.48□□□□□ -1.69
P20040 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
P20040 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
P20040 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC4.48□□□□□ -1.69
P20040 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
P20040 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
P20040 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
P20040 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.48□□□□□ -1.69
P20040 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
P20040 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.48□□□□□ -1.69
P20040 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms