Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Cdx1P18111 Gm44795-201ENSMUST00000205496 319 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm19269-201ENSMUST00000211401 804 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cdx1P18111 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 AC154851.2-201ENSMUST00000222172 644 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 AC126554.2-201ENSMUST00000223259 400 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 AC154583.1-201ENSMUST00000224788 655 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Cdx1P18111 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cdx1P18111 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Cdx1P18111 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cdx1P18111 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cdx1P18111 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cdx1P18111 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cdx1P18111 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cdx1P18111 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cdx1P18111 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cdx1P18111 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cdx1P18111 Gm38029-201ENSMUST00000192669 2090 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.26□□□□□ -1.73
Cdx1P18111 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Cdx1P18111 Gm37407-201ENSMUST00000194793 1316 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cdx1P18111 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cdx1P18111 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
Cdx1P18111 Gm37686-201ENSMUST00000194099 2309 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm24265-201ENSMUST00000101833 141 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cdx1P18111 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cdx1P18111 Gm26078-201ENSMUST00000104067 128 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm23746-201ENSMUST00000104229 125 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm13484-201ENSMUST00000120738 412 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdx1P18111 Gm26086-201ENSMUST00000157902 263 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm9006-201ENSMUST00000165520 841 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cdx1P18111 Gm4134-201ENSMUST00000173244 563 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm16456-201ENSMUST00000174431 920 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Mir3110-201ENSMUST00000175053 80 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm29124-201ENSMUST00000186576 452 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Cdx1P18111 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdx1P18111 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.26□□□□□ -1.73
Cdx1P18111 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC4.26□□□□□ -1.73
Cdx1P18111 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm38008-201ENSMUST00000195333 518 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm42694-201ENSMUST00000196951 358 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC4.26□□□□□ -1.73
Cdx1P18111 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cdx1P18111 Gm7181-201ENSMUST00000202197 434 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm44432-201ENSMUST00000203342 938 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Cdx1P18111 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm8523-201ENSMUST00000211386 552 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm45908-201ENSMUST00000212977 1177 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm10709-201ENSMUST00000213318 480 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cdx1P18111 AC138284.5-201ENSMUST00000214389 652 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC4.26□□□□□ -1.73
Cdx1P18111 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cdx1P18111 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cdx1P18111 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cdx1P18111 Gm23330-201ENSMUST00000082660 164 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cdx1P18111 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cdx1P18111 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cdx1P18111 Gm10794-201ENSMUST00000099624 207 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cdx1P18111 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cdx1P18111 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.26□□□□□ -1.73
Cdx1P18111 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.26□□□□□ -1.73
Cdx1P18111 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdx1P18111 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Cdx1P18111 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cdx1P18111 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cdx1P18111 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cdx1P18111 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms