Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm44376-201ENSMUST00000197570 128 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm35648-201ENSMUST00000202304 475 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm43968-201ENSMUST00000203388 389 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm43925-201ENSMUST00000203498 206 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm5176-201ENSMUST00000218244 1227 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 AC134254.2-201ENSMUST00000221262 170 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 CT009600.2-201ENSMUST00000226638 481 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Desi2-202ENSMUST00000069568 1193 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hmgb3O54879 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm16335-201ENSMUST00000077495 309 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hmgb3O54879 AC133076.2-201ENSMUST00000227678 3532 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm14806-201ENSMUST00000116606 2110 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hmgb3O54879 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hmgb3O54879 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb3O54879 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb3O54879 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb3O54879 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm25422-201ENSMUST00000104219 129 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm11975-201ENSMUST00000118772 481 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm15490-201ENSMUST00000119894 387 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm15227-201ENSMUST00000121844 399 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb3O54879 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm25445-201ENSMUST00000158996 299 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmgb3O54879 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm16456-201ENSMUST00000174431 920 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm26983-201ENSMUST00000182051 388 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm28468-201ENSMUST00000188536 615 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm6693-201ENSMUST00000189583 813 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm38150-201ENSMUST00000192996 452 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm42542-201ENSMUST00000197978 268 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmgb3O54879 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 AC238676.3-201ENSMUST00000223042 154 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 CT030182.2-201ENSMUST00000223569 620 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Hmgb3O54879 AV026068-231ENSMUST00000225862 482 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Hmgb3O54879 AC121912.1-201ENSMUST00000227525 1201 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Vmn1r41-205ENSMUST00000227630 827 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb3O54879 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb3O54879 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb3O54879 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.94□□□□□ -1.78
Hmgb3O54879 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb3O54879 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb3O54879 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm42494-201ENSMUST00000196515 3051 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm14909-201ENSMUST00000117853 351 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm12760-201ENSMUST00000117861 482 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm14610-201ENSMUST00000118358 966 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm9435-201ENSMUST00000120379 877 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm16179-201ENSMUST00000120685 373 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm13440-201ENSMUST00000121665 496 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms