Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm2142-201ENSMUST00000197899 589 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Gm42776-201ENSMUST00000198031 406 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Gm8930-201ENSMUST00000201693 768 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Gm44108-201ENSMUST00000203525 422 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Gm5318-201ENSMUST00000205249 406 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Gm44538-201ENSMUST00000205615 348 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Gm44910-201ENSMUST00000208451 396 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Gm18586-201ENSMUST00000217265 518 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 AC116589.1-201ENSMUST00000220634 327 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 CT009515.3-201ENSMUST00000226509 671 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.53□□□□□ -1.52
Pcdh1F7BJK1 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm25876-201ENSMUST00000104329 119 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Igkv13-87-201ENSMUST00000114214 286 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm15126-201ENSMUST00000118631 833 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm11512-201ENSMUST00000119669 663 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm13865-201ENSMUST00000120957 865 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm12804-201ENSMUST00000121030 999 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm14903-201ENSMUST00000122435 537 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm7613-201ENSMUST00000139070 487 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm24939-201ENSMUST00000158325 137 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm17511-201ENSMUST00000172206 342 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm20454-201ENSMUST00000172713 221 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm25244-201ENSMUST00000178089 132 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm28412-201ENSMUST00000187243 177 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm37828-201ENSMUST00000192496 432 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm9057-201ENSMUST00000198791 296 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm43243-201ENSMUST00000199964 278 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm43203-201ENSMUST00000200130 558 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm19457-201ENSMUST00000200995 448 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 AC160930.1-201ENSMUST00000227194 337 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm22300-201ENSMUST00000082661 126 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm23097-201ENSMUST00000083448 105 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Mir425-201ENSMUST00000083645 85 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms