Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm42458-201ENSMUST00000201914 369 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Gm6558-201ENSMUST00000191934 1973 ntBASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Gm24239-201ENSMUST00000157791 255 ntBASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Gm15076-201ENSMUST00000117076 474 ntBASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Gm27036-201ENSMUST00000182465 980 ntBASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Gm37791-201ENSMUST00000195081 286 ntBASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a3E9PWQ3 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm14875-201ENSMUST00000120881 319 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm15986-201ENSMUST00000122153 400 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm25264-201ENSMUST00000158519 117 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm21827-201ENSMUST00000178247 423 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Mir6385-201ENSMUST00000184295 105 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm45290-201ENSMUST00000211177 3890 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm43088-201ENSMUST00000197530 2347 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Mir673-201ENSMUST00000102361 91 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm23747-201ENSMUST00000104228 131 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm22132-201ENSMUST00000175316 100 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm38061-201ENSMUST00000192490 365 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm43028-201ENSMUST00000202561 481 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 AC125405.1-201ENSMUST00000226406 589 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm36981-201ENSMUST00000192340 4485 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm8700-201ENSMUST00000222187 3054 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm23766-201ENSMUST00000103894 80 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm14282-201ENSMUST00000119484 240 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm14784-201ENSMUST00000121604 663 ntBASIC4.73□□□□□ -1.65
Col6a3E9PWQ3 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms