Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm8708-201ENSMUST00000188500 906 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm6546-201ENSMUST00000192096 766 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm40598-201ENSMUST00000222953 547 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm42549-201ENSMUST00000202392 7004 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm24469-201ENSMUST00000104487 131 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm9836-201ENSMUST00000117132 216 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm23906-201ENSMUST00000157573 128 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm16114-201ENSMUST00000161930 300 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Mir1947-201ENSMUST00000158235 85 ntBASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Gm23023-201ENSMUST00000158767 109 ntBASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Gm8458-201ENSMUST00000196658 819 ntBASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.43□□□□□ -1.54
Scn3aA2ASI5 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Gm23014-201ENSMUST00000104144 130 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Gm13815-201ENSMUST00000119963 412 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Gm38360-201ENSMUST00000195130 454 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 AL589696.1-201ENSMUST00000225711 330 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Gm24251-201ENSMUST00000157324 114 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Gm37670-201ENSMUST00000193622 229 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Gm3338-201ENSMUST00000220982 269 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scn3aA2ASI5 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Gm15034-201ENSMUST00000120043 349 ntBASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Gm5391-201ENSMUST00000121155 613 ntBASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms