Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm42437-201ENSMUST00000197263 923 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm8719-201ENSMUST00000203602 534 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm18215-201ENSMUST00000204429 798 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm18468-201ENSMUST00000207321 369 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm18470-201ENSMUST00000207467 420 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm18465-201ENSMUST00000207468 369 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm18464-201ENSMUST00000207803 420 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm18458-201ENSMUST00000207908 369 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm18461-201ENSMUST00000208421 420 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm45908-201ENSMUST00000212977 1177 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 CT033778.1-201ENSMUST00000224767 767 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Clec2j-201ENSMUST00000032517 515 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Mir188-201ENSMUST00000083464 68 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm23593-201ENSMUST00000104309 120 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm16205-201ENSMUST00000117720 1027 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm7670-201ENSMUST00000121272 641 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm25176-201ENSMUST00000122640 125 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm5139-201ENSMUST00000175943 249 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm36998-201ENSMUST00000193205 704 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm42458-201ENSMUST00000201914 369 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm44048-201ENSMUST00000204531 361 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm18997-201ENSMUST00000216353 822 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 AC158142.3-201ENSMUST00000226230 675 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm22155-201ENSMUST00000083836 162 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.84□□□□□ -1.63
Trim3Q9R1R2 Gm43319-201ENSMUST00000198036 2270 ntBASIC4.84□□□□□ -1.64
Trim3Q9R1R2 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Trim3Q9R1R2 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm22266-201ENSMUST00000104011 138 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm24235-201ENSMUST00000104319 129 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Mir1188-201ENSMUST00000116756 120 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm25348-201ENSMUST00000158961 111 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm4831-201ENSMUST00000174626 594 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Ighv6-2-201ENSMUST00000192430 295 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm37421-201ENSMUST00000193088 132 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm37882-201ENSMUST00000195254 196 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Gm37445-201ENSMUST00000195318 242 ntBASIC4.83□□□□□ -1.64
Trim3Q9R1R2 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms