Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm28385-201ENSMUST00000185671 292 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm2053-201ENSMUST00000195671 631 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm42428-201ENSMUST00000198677 302 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm6366-201ENSMUST00000198766 826 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Mir20a-201ENSMUST00000083508 107 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm45177-201ENSMUST00000209104 2307 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm6503-201ENSMUST00000210829 2225 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm14985-201ENSMUST00000118693 786 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm12317-201ENSMUST00000122307 319 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm23855-201ENSMUST00000158377 135 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm26925-201ENSMUST00000182470 957 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm18177-201ENSMUST00000188373 404 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm43974-201ENSMUST00000205080 684 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm45690-201ENSMUST00000210775 246 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm17999-201ENSMUST00000211568 542 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Cdc40Q9DC48 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm24578-201ENSMUST00000103970 129 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm3267-201ENSMUST00000118671 473 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm13367-201ENSMUST00000119955 796 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm17014-201ENSMUST00000120765 168 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm12222-201ENSMUST00000121368 260 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm25179-201ENSMUST00000122632 128 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm22804-201ENSMUST00000158052 101 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm22725-201ENSMUST00000158092 110 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm9499-201ENSMUST00000180888 964 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm2950-201ENSMUST00000185530 520 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm37492-201ENSMUST00000191948 376 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm42452-201ENSMUST00000199749 617 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms