Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm27957-201ENSMUST00000184054 127 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 Mir8097-201ENSMUST00000185150 119 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gm2367-201ENSMUST00000192374 472 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gm20162-201ENSMUST00000193629 871 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gm43954-201ENSMUST00000204634 544 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gm44768-201ENSMUST00000205719 393 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gm45700-201ENSMUST00000205866 347 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gm45750-201ENSMUST00000211966 354 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.76□□□□□ -1.33
Clp1Q99LI9 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gm19116-201ENSMUST00000218592 642 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gm7887-201ENSMUST00000056948 537 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gm5582-201ENSMUST00000075251 522 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Clp1Q99LI9 AC164102.1-201ENSMUST00000220524 1553 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 AC154323.3-201ENSMUST00000226927 1660 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.76□□□□□ -1.33
Clp1Q99LI9 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Clp1Q99LI9 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Clp1Q99LI9 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm13806-201ENSMUST00000117822 325 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm14677-201ENSMUST00000117866 486 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm13454-201ENSMUST00000118166 483 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm26023-201ENSMUST00000122722 313 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm25807-201ENSMUST00000122783 305 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm22452-201ENSMUST00000122804 104 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm25057-201ENSMUST00000157366 88 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm22724-201ENSMUST00000158091 127 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm18522-201ENSMUST00000173947 650 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Mir3572-201ENSMUST00000175549 86 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm25873-201ENSMUST00000180317 107 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm38329-201ENSMUST00000193473 427 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm37119-201ENSMUST00000195691 389 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm35013-201ENSMUST00000197218 832 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm43148-201ENSMUST00000198237 520 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm43142-201ENSMUST00000198670 361 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm45063-201ENSMUST00000203726 472 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm44833-201ENSMUST00000208368 331 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm7780-201ENSMUST00000214787 406 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 AC139758.1-201ENSMUST00000226573 930 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 AC122034.1-201ENSMUST00000227641 595 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm22810-201ENSMUST00000082741 158 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm24928-201ENSMUST00000083399 107 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm25897-201ENSMUST00000083709 107 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.75□□□□□ -1.33
Clp1Q99LI9 Gm35755-201ENSMUST00000222392 2077 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms