Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Gm42459-201ENSMUST00000199679 742 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Gm43309-201ENSMUST00000200837 458 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Gm32453-201ENSMUST00000204183 456 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Gm44134-202ENSMUST00000204777 545 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Gm44559-201ENSMUST00000207177 1012 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Gm7128-201ENSMUST00000211639 533 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 AC131117.1-201ENSMUST00000225154 1171 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cstf1Q99LC2 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm12110-201ENSMUST00000121601 579 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm11679-201ENSMUST00000121830 779 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm23023-201ENSMUST00000158767 109 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm22116-201ENSMUST00000158791 141 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Scarna10-201ENSMUST00000158992 325 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm6647-201ENSMUST00000170514 641 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm29086-201ENSMUST00000186774 222 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm29085-201ENSMUST00000187108 225 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm37908-201ENSMUST00000195828 470 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm44607-201ENSMUST00000205611 1090 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm44757-201ENSMUST00000206373 157 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm44603-201ENSMUST00000206820 367 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm45209-201ENSMUST00000207122 353 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm2059-201ENSMUST00000212025 287 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm9512-201ENSMUST00000223112 497 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Nsa2-203ENSMUST00000225410 974 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Mir346-201ENSMUST00000083547 98 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm28240-201ENSMUST00000187560 2053 ntBASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Cstf1Q99LC2 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms