Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.71□□□□□ -1.5
Ndc1Q8VCB1 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ndc1Q8VCB1 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.71□□□□□ -1.5
Ndc1Q8VCB1 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ndc1Q8VCB1 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ndc1Q8VCB1 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.71□□□□□ -1.5
Ndc1Q8VCB1 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.71□□□□□ -1.5
Ndc1Q8VCB1 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.71□□□□□ -1.5
Ndc1Q8VCB1 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm20486-201ENSMUST00000101544 128 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm25345-201ENSMUST00000104505 133 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm12193-201ENSMUST00000117250 379 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm13193-201ENSMUST00000117275 225 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm13641-201ENSMUST00000117993 473 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm15126-201ENSMUST00000118631 833 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm12880-201ENSMUST00000120652 494 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm11852-201ENSMUST00000120806 222 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm11848-201ENSMUST00000121207 973 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm24359-201ENSMUST00000158418 221 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm7316-201ENSMUST00000165395 445 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm18354-201ENSMUST00000173515 1068 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Mup-ps7-201ENSMUST00000178292 545 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Mup-ps8-201ENSMUST00000178663 545 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Mup-ps9-201ENSMUST00000178847 545 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Mup-ps6-201ENSMUST00000179564 545 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm17934-201ENSMUST00000192818 422 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm3933-201ENSMUST00000195391 439 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Trav15d-3-201ENSMUST00000198604 167 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm31211-201ENSMUST00000199170 253 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm45157-201ENSMUST00000208729 401 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 AC102603.1-201ENSMUST00000227481 584 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm21286-201ENSMUST00000098035 545 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.7□□□□□ -1.5
Ndc1Q8VCB1 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ndc1Q8VCB1 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Ndc1Q8VCB1 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ndc1Q8VCB1 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.69□□□□□ -1.5
Ndc1Q8VCB1 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ndc1Q8VCB1 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ndc1Q8VCB1 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ndc1Q8VCB1 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.69□□□□□ -1.5
Ndc1Q8VCB1 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ndc1Q8VCB1 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.69□□□□□ -1.5
Ndc1Q8VCB1 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms