Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 AC134254.4-201ENSMUST00000223086 370 ntBASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc9Q8VC31 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm37733-201ENSMUST00000195478 2962 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Mir466f-3-201ENSMUST00000104788 94 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm14417-201ENSMUST00000120036 1074 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm12978-201ENSMUST00000121250 522 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm14905-201ENSMUST00000122351 639 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm6182-201ENSMUST00000156439 1208 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm22804-201ENSMUST00000158052 101 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm24944-201ENSMUST00000158330 128 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm23386-201ENSMUST00000158585 144 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm24741-201ENSMUST00000158857 106 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm17366-201ENSMUST00000167629 187 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm22857-201ENSMUST00000174969 134 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm43946-201ENSMUST00000204058 886 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm38574-201ENSMUST00000211855 640 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm37174-201ENSMUST00000194699 3058 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm18300-201ENSMUST00000192792 1406 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc9Q8VC31 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm22371-201ENSMUST00000104588 130 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm11325-201ENSMUST00000119967 469 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm14925-201ENSMUST00000120611 438 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm13578-201ENSMUST00000120849 590 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm12890-201ENSMUST00000120885 373 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm5392-201ENSMUST00000122189 789 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm23171-201ENSMUST00000157159 264 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm24239-201ENSMUST00000157791 255 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm9027-201ENSMUST00000165914 661 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm24111-201ENSMUST00000175491 97 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm20620-201ENSMUST00000177528 168 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm3489-201ENSMUST00000190083 528 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 CT025526.1-201ENSMUST00000217327 267 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 CT025556.1-201ENSMUST00000222965 1884 ntBASIC6.22□□□□□ -1.41
Ccdc9Q8VC31 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Ccdc9Q8VC31 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ccdc9Q8VC31 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms