Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm16563-201ENSMUST00000162673 423 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm8358-201ENSMUST00000167222 555 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm26318-201ENSMUST00000176507 96 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm29474-201ENSMUST00000187688 379 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm18117-201ENSMUST00000187720 742 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm28396-201ENSMUST00000190309 379 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm6520-201ENSMUST00000200636 410 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm18255-201ENSMUST00000211316 765 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm19233-201ENSMUST00000219772 936 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 AC155922.1-201ENSMUST00000220100 373 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm18247-201ENSMUST00000222937 601 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 AV026068-237ENSMUST00000226075 572 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm23459-201ENSMUST00000083259 131 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm28359-201ENSMUST00000187470 1322 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm11826-201ENSMUST00000118781 438 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm23965-201ENSMUST00000157969 142 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm22312-201ENSMUST00000158005 130 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm3170-201ENSMUST00000168753 850 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm20545-201ENSMUST00000174739 210 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm3348-201ENSMUST00000177813 850 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm18553-201ENSMUST00000194152 634 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm42452-201ENSMUST00000199749 617 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm3148-201ENSMUST00000203594 612 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm43967-201ENSMUST00000203787 301 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm45269-201ENSMUST00000210359 282 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm45608-201ENSMUST00000210948 389 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm18850-201ENSMUST00000211578 388 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm19174-201ENSMUST00000216944 956 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm8137-201ENSMUST00000218997 463 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 AC173345.3-201ENSMUST00000221245 1093 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Vps53Q8CCB4 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.4
Vps53Q8CCB4 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.4
Vps53Q8CCB4 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
Vps53Q8CCB4 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
Vps53Q8CCB4 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.27□□□□□ -1.41
Vps53Q8CCB4 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Vps53Q8CCB4 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6.27□□□□□ -1.41
Vps53Q8CCB4 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Vps53Q8CCB4 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Vps53Q8CCB4 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.27□□□□□ -1.41
Vps53Q8CCB4 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Vps53Q8CCB4 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms