Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Gm27896-201ENSMUST00000175162 317 ntBASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Gm21654-201ENSMUST00000188086 691 ntBASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Gm38185-201ENSMUST00000193195 694 ntBASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Gm44852-201ENSMUST00000207950 369 ntBASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Gm18462-201ENSMUST00000208112 417 ntBASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Gm19921-201ENSMUST00000210505 703 ntBASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 CT009765.2-201ENSMUST00000221331 392 ntBASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Gm7093-201ENSMUST00000223004 581 ntBASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Olfr480-201ENSMUST00000071658 1029 ntBASIC4.41□□□□□ -1.7
Col6a6Q8C6K9 Gm37769-201ENSMUST00000193753 2369 ntBASIC4.4□□□□□ -1.7
Col6a6Q8C6K9 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a6Q8C6K9 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.4□□□□□ -1.7
Col6a6Q8C6K9 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a6Q8C6K9 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a6Q8C6K9 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Col6a6Q8C6K9 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a6Q8C6K9 AC141476.1-201ENSMUST00000224988 3387 ntBASIC4.4□□□□□ -1.7
Col6a6Q8C6K9 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a6Q8C6K9 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a6Q8C6K9 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
Col6a6Q8C6K9 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC4.4□□□□□ -1.7
Col6a6Q8C6K9 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 AC154257.1-201ENSMUST00000224811 1525 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm15752-201ENSMUST00000117427 394 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm12112-201ENSMUST00000117772 231 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm11196-201ENSMUST00000119052 395 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm14122-201ENSMUST00000122076 973 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm22204-201ENSMUST00000122654 327 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm23465-201ENSMUST00000157134 262 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm20614-201ENSMUST00000177106 632 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm3145-201ENSMUST00000188584 220 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm43968-201ENSMUST00000203388 389 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 AC160028.2-201ENSMUST00000218937 2519 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm43485-201ENSMUST00000199292 1710 ntBASIC4.4□□□□□ -1.71
Col6a6Q8C6K9 Gm45001-201ENSMUST00000208279 2515 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm23294-201ENSMUST00000104150 164 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm24251-201ENSMUST00000157324 114 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm38257-201ENSMUST00000195881 2761 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm15583-201ENSMUST00000116191 3510 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm44224-201ENSMUST00000204131 1463 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm23481-201ENSMUST00000104173 131 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm14854-201ENSMUST00000117758 841 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm16106-201ENSMUST00000119187 294 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm13973-201ENSMUST00000121371 894 ntBASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a6Q8C6K9 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms