Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm4541-201ENSMUST00000208901 1848 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm14082-201ENSMUST00000118582 801 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm23046-201ENSMUST00000158369 284 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm25714-201ENSMUST00000158626 296 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm37973-201ENSMUST00000195767 1289 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm44253-201ENSMUST00000203387 628 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm44402-201ENSMUST00000203677 238 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 AC154627.3-201ENSMUST00000228441 334 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm23626-201ENSMUST00000082458 133 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 AC120153.1-201ENSMUST00000226502 1311 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 AC102431.1-201ENSMUST00000223773 1449 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.16□□□□□ -1.42
Ccdc60Q8C4J0 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Gm9836-201ENSMUST00000117132 216 ntBASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Gm14706-201ENSMUST00000117744 255 ntBASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Gm24217-201ENSMUST00000158260 133 ntBASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Gm22326-201ENSMUST00000158897 351 ntBASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Gm28976-201ENSMUST00000188070 144 ntBASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Gm2607-201ENSMUST00000212389 627 ntBASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc60Q8C4J0 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ccdc60Q8C4J0 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.15□□□□□ -1.43
Ccdc60Q8C4J0 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.15□□□□□ -1.43
Ccdc60Q8C4J0 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ccdc60Q8C4J0 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
Ccdc60Q8C4J0 AC149588.1-201ENSMUST00000228274 3745 ntBASIC6.15□□□□□ -1.43
Ccdc60Q8C4J0 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Gm13961-201ENSMUST00000119282 4772 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Gm24160-201ENSMUST00000104594 126 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Gm24188-201ENSMUST00000157980 108 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Gm16107-201ENSMUST00000162523 862 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Gm17043-201ENSMUST00000164621 1283 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Gm8614-201ENSMUST00000182528 978 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Mir6344-201ENSMUST00000183462 104 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Gm36986-201ENSMUST00000195320 353 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Gm6261-201ENSMUST00000204707 760 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Gm7333-201ENSMUST00000213449 1060 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 AC211878.2-201ENSMUST00000222486 488 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 AC190403.1-201ENSMUST00000224515 1325 ntBASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc60Q8C4J0 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc60Q8C4J0 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc60Q8C4J0 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc60Q8C4J0 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 123.8 ms