Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim35Q8C006 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim35Q8C006 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Trim35Q8C006 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim35Q8C006 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim35Q8C006 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm25089-201ENSMUST00000102015 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Mir466b-3-201ENSMUST00000103806 81 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm14714-201ENSMUST00000119743 439 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm13396-201ENSMUST00000120617 271 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm4886-201ENSMUST00000121874 1176 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm23167-201ENSMUST00000157155 103 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm25716-201ENSMUST00000158628 104 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm4252-201ENSMUST00000174823 313 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Ly6g6c-203ENSMUST00000174876 723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Mir3964-201ENSMUST00000174898 74 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm23413-201ENSMUST00000175521 125 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm25840-201ENSMUST00000177821 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm24952-201ENSMUST00000177909 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm23682-201ENSMUST00000178146 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm24652-201ENSMUST00000178223 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm22629-201ENSMUST00000178272 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm24021-201ENSMUST00000178435 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm22274-201ENSMUST00000178441 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm22050-201ENSMUST00000178442 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm23688-201ENSMUST00000178502 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm23944-201ENSMUST00000178607 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm26283-201ENSMUST00000178625 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm25452-201ENSMUST00000178776 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm23286-201ENSMUST00000178963 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm22640-201ENSMUST00000179035 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm25984-201ENSMUST00000179129 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm25585-201ENSMUST00000179469 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm26374-201ENSMUST00000179737 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm24040-201ENSMUST00000179786 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm25017-201ENSMUST00000179805 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm23618-201ENSMUST00000179912 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm26284-201ENSMUST00000180107 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm24570-201ENSMUST00000180314 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm24654-201ENSMUST00000180315 79 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm27651-201ENSMUST00000183465 246 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm43394-201ENSMUST00000198671 694 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC8.21□□□□□ -1.1
Trim35Q8C006 AC131795.1-201ENSMUST00000219632 426 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 AC122539.2-201ENSMUST00000220207 404 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 AC124581.4-201ENSMUST00000225874 463 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 AC114572.1-201ENSMUST00000227262 300 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC8.21□□□□□ -1.1
Trim35Q8C006 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.1
Trim35Q8C006 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trim35Q8C006 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim35Q8C006 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim35Q8C006 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim35Q8C006 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim35Q8C006 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Cyp4a29-201ENSMUST00000118278 1530 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim35Q8C006 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm7328-201ENSMUST00000211123 2225 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Tdpoz1-201ENSMUST00000094413 2237 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm22268-201ENSMUST00000104009 131 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm25097-201ENSMUST00000104042 145 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm15926-201ENSMUST00000120492 550 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm11897-201ENSMUST00000121976 828 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm24629-201ENSMUST00000122762 89 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm25069-201ENSMUST00000175238 86 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm28920-201ENSMUST00000189957 699 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm8010-201ENSMUST00000194128 873 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm37108-201ENSMUST00000194605 626 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC8.2□□□□□ -1.1
Trim35Q8C006 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms