Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Mir6911-201ENSMUST00000184241 69 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm28579-201ENSMUST00000186143 369 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm21654-201ENSMUST00000188086 691 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm29284-201ENSMUST00000188363 255 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm28620-201ENSMUST00000190463 439 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm2926-201ENSMUST00000205625 239 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm45070-201ENSMUST00000208100 246 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 AC151907.1-201ENSMUST00000228812 412 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 n-R5s86-201ENSMUST00000083215 119 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm3665-201ENSMUST00000177214 2461 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm24273-201ENSMUST00000102332 164 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm14670-201ENSMUST00000117327 337 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm11386-201ENSMUST00000117761 347 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm15266-201ENSMUST00000119635 255 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm14614-201ENSMUST00000119873 384 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm11522-201ENSMUST00000120533 176 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm15618-201ENSMUST00000121610 452 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm6081-201ENSMUST00000134472 489 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm24444-201ENSMUST00000157244 308 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm26271-201ENSMUST00000158349 104 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm26173-201ENSMUST00000158416 136 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm25675-201ENSMUST00000174979 118 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm18006-201ENSMUST00000177411 662 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm25598-201ENSMUST00000179031 107 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm27348-201ENSMUST00000184511 170 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm20926-201ENSMUST00000194457 696 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm43856-201ENSMUST00000197004 369 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 AC161520.1-201ENSMUST00000210954 939 ntBASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sh3rf1Q69ZI1 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms