Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm4501-201ENSMUST00000207330 551 ntBASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm4528-201ENSMUST00000207905 551 ntBASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 n-R5s85-201ENSMUST00000083453 113 ntBASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm37745-201ENSMUST00000193304 8163 ntBASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC11.38□□□□□ -0.59
Trim41Q5NCC3 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm43181-201ENSMUST00000197001 2072 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm9408-201ENSMUST00000197375 1505 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm15480-201ENSMUST00000120442 519 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm11965-201ENSMUST00000122017 277 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm22599-201ENSMUST00000157597 132 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm24737-201ENSMUST00000158861 100 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Mir6943-201ENSMUST00000185186 66 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm5734-201ENSMUST00000189787 913 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm3841-201ENSMUST00000191399 451 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm18103-201ENSMUST00000216621 779 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 AC137871.2-201ENSMUST00000226482 289 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm23407-201ENSMUST00000082538 91 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm24525-201ENSMUST00000082917 151 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 n-R5s58-201ENSMUST00000093682 119 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 AC156636.1-201ENSMUST00000218639 2229 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm6215-201ENSMUST00000119297 1386 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm7905-201ENSMUST00000119933 1386 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm6207-201ENSMUST00000120075 1386 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm6228-201ENSMUST00000178856 1386 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm6221-201ENSMUST00000180064 1386 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Gm36981-201ENSMUST00000192340 4485 ntBASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Trim41Q5NCC3 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm37169-201ENSMUST00000195599 4161 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm42440-201ENSMUST00000197906 2284 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm3940-201ENSMUST00000105087 432 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm3943-201ENSMUST00000118606 718 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm23031-201ENSMUST00000157998 119 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm16164-201ENSMUST00000160078 468 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm19840-201ENSMUST00000169624 882 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm27970-201ENSMUST00000184854 407 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm29148-201ENSMUST00000188140 336 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm21728-201ENSMUST00000188442 695 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm21889-201ENSMUST00000188487 695 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm21920-201ENSMUST00000190042 695 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm29551-201ENSMUST00000190913 698 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 AC120540.1-201ENSMUST00000221879 324 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 AC165260.1-201ENSMUST00000224127 683 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm15732-201ENSMUST00000079794 480 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm45297-201ENSMUST00000209893 3483 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Gm30698-201ENSMUST00000214789 3198 ntBASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trim41Q5NCC3 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms