Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gm3267-201ENSMUST00000118671 473 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gm24371-201ENSMUST00000122662 267 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gm23700-201ENSMUST00000158842 102 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gm17081-201ENSMUST00000167363 478 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Mir7020-201ENSMUST00000183787 70 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gm9569-201ENSMUST00000187492 787 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gm29161-201ENSMUST00000188250 699 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gm37884-201ENSMUST00000191857 818 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gm19095-201ENSMUST00000220533 730 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gm7040-201ENSMUST00000223271 443 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.31□□□□□ -1.56
Upf3bQ3ULL6 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Lipe-203ENSMUST00000105177 1251 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm11313-201ENSMUST00000118779 432 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm16345-201ENSMUST00000146065 158 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm5777-201ENSMUST00000177265 448 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm18802-201ENSMUST00000186270 888 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm18426-201ENSMUST00000191874 973 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm37631-201ENSMUST00000192275 364 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm2979-201ENSMUST00000193442 463 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm20940-201ENSMUST00000197308 360 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm7822-201ENSMUST00000222433 581 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Gm5215-201ENSMUST00000054380 405 ntBASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms