Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 AL589696.1-201ENSMUST00000225711 330 ntBASIC8.04□□□□□ -1.12
Col17a1Q07563 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col17a1Q07563 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC8.04□□□□□ -1.12
Col17a1Q07563 Gm43229-201ENSMUST00000201812 1850 ntBASIC8.04□□□□□ -1.12
Col17a1Q07563 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Col17a1Q07563 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm42819-201ENSMUST00000199630 5121 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col17a1Q07563 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm22269-201ENSMUST00000104002 130 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm23294-201ENSMUST00000104150 164 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm11227-201ENSMUST00000119774 471 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm15791-201ENSMUST00000120365 319 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm12654-201ENSMUST00000120387 587 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm14603-201ENSMUST00000121275 448 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm15790-201ENSMUST00000161109 1251 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm3091-201ENSMUST00000163408 484 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm11394-201ENSMUST00000181421 517 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm27883-201ENSMUST00000183941 102 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm38011-201ENSMUST00000193312 279 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Trbv27-201ENSMUST00000193711 277 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Mir129b-201ENSMUST00000197461 65 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm43531-201ENSMUST00000200676 1114 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm45434-201ENSMUST00000210550 293 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC8.03□□□□□ -1.12
Col17a1Q07563 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC8.03□□□□□ -1.12
Col17a1Q07563 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC8.03□□□□□ -1.12
Col17a1Q07563 AC122924.1-201ENSMUST00000222044 163 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Col17a1Q07563 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm10845-202ENSMUST00000228217 3389 ntBASIC8.03□□□□□ -1.12
Col17a1Q07563 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC8.03□□□□□ -1.12
Col17a1Q07563 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col17a1Q07563 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col17a1Q07563 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col17a1Q07563 AC103672.3-201ENSMUST00000227649 3243 ntBASIC8.02□□□□□ -1.12
Col17a1Q07563 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Col17a1Q07563 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col17a1Q07563 Gm24186-201ENSMUST00000157983 127 ntBASIC8.02□□□□□ -1.13
Col17a1Q07563 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col17a1Q07563 Gm27805-201ENSMUST00000184513 79 ntBASIC8.02□□□□□ -1.13
Col17a1Q07563 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col17a1Q07563 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC8.02□□□□□ -1.13
Col17a1Q07563 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC8.02□□□□□ -1.13
Col17a1Q07563 Gm18242-201ENSMUST00000218455 542 ntBASIC8.02□□□□□ -1.13
Col17a1Q07563 Gm7822-201ENSMUST00000222433 581 ntBASIC8.02□□□□□ -1.13
Col17a1Q07563 Gm5374-202ENSMUST00000222910 314 ntBASIC8.02□□□□□ -1.13
Col17a1Q07563 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col17a1Q07563 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC8.02□□□□□ -1.13
Col17a1Q07563 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col17a1Q07563 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC8.02□□□□□ -1.13
Col17a1Q07563 Gm42798-201ENSMUST00000200853 3972 ntBASIC8.02□□□□□ -1.13
Col17a1Q07563 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col17a1Q07563 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col17a1Q07563 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col17a1Q07563 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col17a1Q07563 Gm37115-201ENSMUST00000193750 2849 ntBASIC8.01□□□□□ -1.13
Col17a1Q07563 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Col17a1Q07563 Gm12327-201ENSMUST00000121729 1168 ntBASIC8.01□□□□□ -1.13
Col17a1Q07563 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col17a1Q07563 Gm14710-201ENSMUST00000146082 1066 ntBASIC8.01□□□□□ -1.13
Col17a1Q07563 Gm24998-201ENSMUST00000157908 89 ntBASIC8.01□□□□□ -1.13
Col17a1Q07563 Gm24553-201ENSMUST00000158653 131 ntBASIC8.01□□□□□ -1.13
Col17a1Q07563 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Col17a1Q07563 Gm27148-201ENSMUST00000185086 160 ntBASIC8.01□□□□□ -1.13
Col17a1Q07563 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col17a1Q07563 AC120394.1-201ENSMUST00000217153 351 ntBASIC8.01□□□□□ -1.13
Col17a1Q07563 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC8.01□□□□□ -1.13
Col17a1Q07563 AC102352.1-201ENSMUST00000224187 582 ntBASIC8.01□□□□□ -1.13
Col17a1Q07563 AC113269.1-201ENSMUST00000227185 674 ntBASIC8.01□□□□□ -1.13
Col17a1Q07563 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Col17a1Q07563 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col17a1Q07563 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col17a1Q07563 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col17a1Q07563 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Col17a1Q07563 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Col17a1Q07563 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col17a1Q07563 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Col17a1Q07563 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Col17a1Q07563 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms