Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm36448-201ENSMUST00000199916 438 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm43897-201ENSMUST00000204019 309 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm7890-201ENSMUST00000204877 601 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 CT485612.3-201ENSMUST00000222179 408 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm3565-201ENSMUST00000222670 609 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm7768-201ENSMUST00000222988 597 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm9202-201ENSMUST00000223036 437 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 AC163660.1-201ENSMUST00000223696 818 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col8a1Q00780 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col8a1Q00780 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm25682-201ENSMUST00000083942 164 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 AC154511.1-201ENSMUST00000222578 1587 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm10258-201ENSMUST00000091270 2123 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 AC129308.2-203ENSMUST00000224109 2385 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm38366-201ENSMUST00000193127 1934 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l9-201ENSMUST00000101891 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm26504-201ENSMUST00000102033 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm15016-201ENSMUST00000117300 720 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm12386-201ENSMUST00000117380 688 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm12717-201ENSMUST00000118427 983 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm12303-201ENSMUST00000119506 673 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm8757-201ENSMUST00000119660 372 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm16423-201ENSMUST00000120078 947 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm12578-201ENSMUST00000121244 417 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm12222-201ENSMUST00000121368 260 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm13162-201ENSMUST00000121481 454 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm17142-201ENSMUST00000164933 645 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm18833-201ENSMUST00000173218 862 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm22258-201ENSMUST00000177645 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm26502-201ENSMUST00000177732 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l13-201ENSMUST00000177737 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm25350-201ENSMUST00000177849 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l15-201ENSMUST00000177940 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm23446-201ENSMUST00000177977 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l4-201ENSMUST00000177982 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm26201-201ENSMUST00000178047 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm24711-201ENSMUST00000178062 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm24609-201ENSMUST00000178166 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm23265-201ENSMUST00000178321 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm22812-201ENSMUST00000178329 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l3-201ENSMUST00000178370 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm26246-201ENSMUST00000178388 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm22131-201ENSMUST00000178415 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm25155-201ENSMUST00000178450 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm24760-201ENSMUST00000178530 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm26032-201ENSMUST00000178535 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm22285-201ENSMUST00000178576 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm22776-201ENSMUST00000178634 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm22417-201ENSMUST00000178656 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l2-201ENSMUST00000178675 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Gm26270-201ENSMUST00000178690 94 ntBASIC5.31□□□□□ -1.56
Col8a1Q00780 Snord116l16-201ENSMUST00000178777 94 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 159.8 ms