Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm22220-201ENSMUST00000082671 149 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm25260-201ENSMUST00000083053 134 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm22826-201ENSMUST00000083774 165 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Nkx3-1P97436 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Nkx3-1P97436 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm38351-201ENSMUST00000195466 2518 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm15493-201ENSMUST00000119461 528 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm15905-201ENSMUST00000137042 298 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm25846-201ENSMUST00000158013 135 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm25348-201ENSMUST00000158961 111 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm22119-201ENSMUST00000175594 99 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm18953-201ENSMUST00000175694 300 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm4714-201ENSMUST00000203395 279 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 AC158511.1-201ENSMUST00000223622 764 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Mir20a-201ENSMUST00000083508 107 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.39□□□□□ -1.71
Nkx3-1P97436 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nkx3-1P97436 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm9077-201ENSMUST00000210657 2298 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm24235-201ENSMUST00000104319 129 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm24469-201ENSMUST00000104487 131 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm16149-201ENSMUST00000117631 309 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm14659-201ENSMUST00000117667 843 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm11212-201ENSMUST00000118337 618 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm17081-201ENSMUST00000167363 478 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Mir6943-201ENSMUST00000185186 66 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm28957-201ENSMUST00000190174 373 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm37973-201ENSMUST00000195767 1289 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms